The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat

The article has a goal to demonstrate capabilities of layer-by-layer overlapping method for 3D-reconstruction of knee joint. The model object was chosen for this research to provide the base for new methods in diagnostics and treatment of human orthopedic diseases. We used the original technology of...

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Main Authors: Terpilovskiy A.A., Tiras K.P., Khoperskov A.V., Novochadov V.V.
Format: Article
Language:Russian
Published: Volgograd State University 2015-12-01
Series:Vestnik Volgogradskogo Gosudarstvennogo Universiteta. Seriâ 11. Estestvennye Nauki
Subjects:
rat
Online Access:http://ns.jvolsu.com/index.php/en/component/attachments/download/367
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spelling doaj-bfe95d625512479ebba1ef1acd7c43c12020-11-24T22:45:12ZrusVolgograd State UniversityVestnik Volgogradskogo Gosudarstvennogo Universiteta. Seriâ 11. Estestvennye Nauki2306-41532409-27622015-12-01461410.15688/jvolsu11.2015.4.1The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a RatTerpilovskiy A.A.0Tiras K.P.1Khoperskov A.V.2Novochadov V.V.3Laboratory of Virtual Biology LTDPushchino State Natural Science InstituteVolgograd State UniversityVolgograd State UniversityThe article has a goal to demonstrate capabilities of layer-by-layer overlapping method for 3D-reconstruction of knee joint. The model object was chosen for this research to provide the base for new methods in diagnostics and treatment of human orthopedic diseases. We used the original technology of high-precision grinding and compared the ability of quantitative analysis of bone and cartilage tissue on 3D models to the capabilities of classical morphometry of histological slices. Obtained digitized images of thin sections (1200-2600 on each of the 8 joints) had a pixel size of 8 x 8 μm, with a vertical step grinding 8 μm. Its software processing allows for the construction of a virtual slice with an offset and slope, required for the adequate visualization of the biological structures. The developed method of high-precision grinding allows obtaining series of digitized cross-sectional images of biological objects, so the virtual object created on its base, is almost devoid of spatial deformations and distortions of color. Morphometric analysis of these 3D reconstructions in terms of precision and informativeness is not inferior, and according to some indicators it exceeds the quantitative study of serial histological sections. The reconstruction, obtained using the high-precision grinding, can be used to create virtual museum exhibits, atlases and manuals in various biological sciences, based on morphological approach to the cognition of its objects. Another application of reconstruction is to convert them into virtual simulators on the principles of augmented reality or into the models for 3D printing of physical simulators and working prototypes for medicine, veterinary, animal science and related areas. This will be of most value where an MRI or histological reconstruction did not provide full three-dimensional picture.http://ns.jvolsu.com/index.php/en/component/attachments/download/3673D imaging3D reconstructionknee jointmorphologyarticular cartilagebonerat
collection DOAJ
language Russian
format Article
sources DOAJ
author Terpilovskiy A.A.
Tiras K.P.
Khoperskov A.V.
Novochadov V.V.
spellingShingle Terpilovskiy A.A.
Tiras K.P.
Khoperskov A.V.
Novochadov V.V.
The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
Vestnik Volgogradskogo Gosudarstvennogo Universiteta. Seriâ 11. Estestvennye Nauki
3D imaging
3D reconstruction
knee joint
morphology
articular cartilage
bone
rat
author_facet Terpilovskiy A.A.
Tiras K.P.
Khoperskov A.V.
Novochadov V.V.
author_sort Terpilovskiy A.A.
title The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
title_short The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
title_full The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
title_fullStr The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
title_full_unstemmed The Possibilities of Full-Color Three-Dimensional Reconstruction of Biological Objects by the Method of Layer-By-Layer Overlapping: Knee Joint of a Rat
title_sort possibilities of full-color three-dimensional reconstruction of biological objects by the method of layer-by-layer overlapping: knee joint of a rat
publisher Volgograd State University
series Vestnik Volgogradskogo Gosudarstvennogo Universiteta. Seriâ 11. Estestvennye Nauki
issn 2306-4153
2409-2762
publishDate 2015-12-01
description The article has a goal to demonstrate capabilities of layer-by-layer overlapping method for 3D-reconstruction of knee joint. The model object was chosen for this research to provide the base for new methods in diagnostics and treatment of human orthopedic diseases. We used the original technology of high-precision grinding and compared the ability of quantitative analysis of bone and cartilage tissue on 3D models to the capabilities of classical morphometry of histological slices. Obtained digitized images of thin sections (1200-2600 on each of the 8 joints) had a pixel size of 8 x 8 μm, with a vertical step grinding 8 μm. Its software processing allows for the construction of a virtual slice with an offset and slope, required for the adequate visualization of the biological structures. The developed method of high-precision grinding allows obtaining series of digitized cross-sectional images of biological objects, so the virtual object created on its base, is almost devoid of spatial deformations and distortions of color. Morphometric analysis of these 3D reconstructions in terms of precision and informativeness is not inferior, and according to some indicators it exceeds the quantitative study of serial histological sections. The reconstruction, obtained using the high-precision grinding, can be used to create virtual museum exhibits, atlases and manuals in various biological sciences, based on morphological approach to the cognition of its objects. Another application of reconstruction is to convert them into virtual simulators on the principles of augmented reality or into the models for 3D printing of physical simulators and working prototypes for medicine, veterinary, animal science and related areas. This will be of most value where an MRI or histological reconstruction did not provide full three-dimensional picture.
topic 3D imaging
3D reconstruction
knee joint
morphology
articular cartilage
bone
rat
url http://ns.jvolsu.com/index.php/en/component/attachments/download/367
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