On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure
Deterministic and stochastic models of chemical reaction kinetics can give starkly different results when the deterministic model exhibits more than one stable solution. For example, in the stochastic Schlögl model, the bimodal stationary probability distribution collapses to a unimodal dis...
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doaj-befa19cbfde845daac43f71c31be69ea2020-11-24T21:04:42ZengMDPI AGEntropy1099-43002018-09-0120967810.3390/e20090678e20090678On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-ClosureMichail Vlysidis0Yiannis N. Kaznessis1Department of Chemical Engineering and Materials Science, University of Minnesota, Minneapolis, MN 55455, USADepartment of Chemical Engineering and Materials Science, University of Minnesota, Minneapolis, MN 55455, USADeterministic and stochastic models of chemical reaction kinetics can give starkly different results when the deterministic model exhibits more than one stable solution. For example, in the stochastic Schlögl model, the bimodal stationary probability distribution collapses to a unimodal distribution when the system size increases, even for kinetic constant values that result in two distinct stable solutions in the deterministic Schlögl model. Using zero-information (ZI) closure scheme, an algorithm for solving chemical master equations, we compute stationary probability distributions for varying system sizes of the Schlögl model. With ZI-closure, system sizes can be studied that have been previously unattainable by stochastic simulation algorithms. We observe and quantify paradoxical discrepancies between stochastic and deterministic models and explain this behavior by postulating that the entropy of non-equilibrium steady states (NESS) is maximum.http://www.mdpi.com/1099-4300/20/9/678closure schememaximum entropynon-equilibrium steady stateSchlögl |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Michail Vlysidis Yiannis N. Kaznessis |
spellingShingle |
Michail Vlysidis Yiannis N. Kaznessis On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure Entropy closure scheme maximum entropy non-equilibrium steady state Schlögl |
author_facet |
Michail Vlysidis Yiannis N. Kaznessis |
author_sort |
Michail Vlysidis |
title |
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure |
title_short |
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure |
title_full |
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure |
title_fullStr |
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure |
title_full_unstemmed |
On Differences between Deterministic and Stochastic Models of Chemical Reactions: Schlögl Solved with ZI-Closure |
title_sort |
on differences between deterministic and stochastic models of chemical reactions: schlögl solved with zi-closure |
publisher |
MDPI AG |
series |
Entropy |
issn |
1099-4300 |
publishDate |
2018-09-01 |
description |
Deterministic and stochastic models of chemical reaction kinetics can give starkly different results when the deterministic model exhibits more than one stable solution. For example, in the stochastic Schlögl model, the bimodal stationary probability distribution collapses to a unimodal distribution when the system size increases, even for kinetic constant values that result in two distinct stable solutions in the deterministic Schlögl model. Using zero-information (ZI) closure scheme, an algorithm for solving chemical master equations, we compute stationary probability distributions for varying system sizes of the Schlögl model. With ZI-closure, system sizes can be studied that have been previously unattainable by stochastic simulation algorithms. We observe and quantify paradoxical discrepancies between stochastic and deterministic models and explain this behavior by postulating that the entropy of non-equilibrium steady states (NESS) is maximum. |
topic |
closure scheme maximum entropy non-equilibrium steady state Schlögl |
url |
http://www.mdpi.com/1099-4300/20/9/678 |
work_keys_str_mv |
AT michailvlysidis ondifferencesbetweendeterministicandstochasticmodelsofchemicalreactionsschloglsolvedwithziclosure AT yiannisnkaznessis ondifferencesbetweendeterministicandstochasticmodelsofchemicalreactionsschloglsolvedwithziclosure |
_version_ |
1716770123348443136 |