Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer
Coronin 2A (CORO2A) is a novel component of the N-CoR (nuclear receptor co-repressor) complex. Abnormal CORO2A expression is associated with carcinogenesis. We used databases from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO), and analyzed CORO2A expression and gene regulation net...
Main Authors: | , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Frontiers Media S.A.
2020-06-01
|
Series: | Frontiers in Oncology |
Subjects: | |
Online Access: | https://www.frontiersin.org/article/10.3389/fonc.2020.00916/full |
id |
doaj-be970a9a2f174f94801b1b6f04bb7262 |
---|---|
record_format |
Article |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jun-Li Deng Jun-Li Deng Jun-Li Deng Jun-Li Deng Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Ying Zeng Ying Zeng Ying Zeng Ying Zeng Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Ying Huang Ying Huang Ying Huang Ying Huang Guo Wang Guo Wang Guo Wang Guo Wang |
spellingShingle |
Jun-Li Deng Jun-Li Deng Jun-Li Deng Jun-Li Deng Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Ying Zeng Ying Zeng Ying Zeng Ying Zeng Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Ying Huang Ying Huang Ying Huang Ying Huang Guo Wang Guo Wang Guo Wang Guo Wang Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer Frontiers in Oncology CORO2A breast cancer migration proliferation prognosis regulatory network |
author_facet |
Jun-Li Deng Jun-Li Deng Jun-Li Deng Jun-Li Deng Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Hai-Bo Zhang Ying Zeng Ying Zeng Ying Zeng Ying Zeng Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Yun-Hua Xu Ying Huang Ying Huang Ying Huang Ying Huang Guo Wang Guo Wang Guo Wang Guo Wang |
author_sort |
Jun-Li Deng |
title |
Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer |
title_short |
Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer |
title_full |
Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer |
title_fullStr |
Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer |
title_full_unstemmed |
Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast Cancer |
title_sort |
effects of coro2a on cell migration and proliferation and its potential regulatory network in breast cancer |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Oncology |
issn |
2234-943X |
publishDate |
2020-06-01 |
description |
Coronin 2A (CORO2A) is a novel component of the N-CoR (nuclear receptor co-repressor) complex. Abnormal CORO2A expression is associated with carcinogenesis. We used databases from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO), and analyzed CORO2A expression and gene regulation networks in breast cancer. Expression was analyzed using GEO and TCGA database and further validated in breast cancer samples collected in our clinic. The prognostic value of CORO2A was explored by using the Kaplan–Meier survival analysis and Cox proportional hazards regression analysis. LinkedOmics was used to identify coexpressed genes associated with CORO2A. After analyzing the intersection of coexpressed genes correlated with CORO2A and differentially expressed genes after CORO2A silencing, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of the intersecting genes were conducted by using FunRich software. Transwell assays were performed in breast cancer cells to determine the effect of CORO2A on cell migration. MTS, colony formation, and cell cycle distribution assays were performed in breast cancer cells to determine the effect of CORO2A on cell proliferation. Gene enrichment analysis was employed to explore the target networks of transcription factors and miRNAs. We found that CORO2A was upregulated and that the elevated expression of CORO2A was associated with poor overall survival (OS) and relapse-free survival (RFS) in TNBC patients. Further bioinformatics analysis of public sequencing data and our own RNA-Seq data revealed that CORO2A was probably involved in the epithelial-to-mesenchymal transition process and might have a significant effect on the migration of breast cancer cells, which might be mediated via pathways involving several miRNAs and MYC transcription factors. Functionally, the knockdown of CORO2A inhibited cell migration, decreased viability, and colony formation and induced cell cycle arrest in the G0/G1 phase in breast cancer cells. These results demonstrate that bioinformatics-based analysis efficiently reveals information about CORO2A expression and its potential regulatory networks in breast cancer, laying a foundation for further mechanistic research on the role of CORO2A in carcinogenesis. Moreover, CORO2A promotes the migration and proliferation of breast cancer cells and may have an important function in breast cancer progression. CORO2A is a potential prognostic predictor for TNBC patients. Targeting CORO2A may provide promising therapy strategies for breast cancer treatment. |
topic |
CORO2A breast cancer migration proliferation prognosis regulatory network |
url |
https://www.frontiersin.org/article/10.3389/fonc.2020.00916/full |
work_keys_str_mv |
AT junlideng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT junlideng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT junlideng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT junlideng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT haibozhang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT haibozhang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT haibozhang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT haibozhang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yingzeng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yingzeng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yingzeng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yingzeng effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yunhuaxu effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yunhuaxu effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yunhuaxu effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yunhuaxu effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yinghuang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yinghuang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yinghuang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT yinghuang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT guowang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT guowang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT guowang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer AT guowang effectsofcoro2aoncellmigrationandproliferationanditspotentialregulatorynetworkinbreastcancer |
_version_ |
1724640654743568384 |
spelling |
doaj-be970a9a2f174f94801b1b6f04bb72622020-11-25T03:15:05ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2020-06-011010.3389/fonc.2020.00916502521Effects of CORO2A on Cell Migration and Proliferation and Its Potential Regulatory Network in Breast CancerJun-Li Deng0Jun-Li Deng1Jun-Li Deng2Jun-Li Deng3Hai-Bo Zhang4Hai-Bo Zhang5Hai-Bo Zhang6Hai-Bo Zhang7Ying Zeng8Ying Zeng9Ying Zeng10Ying Zeng11Yun-Hua Xu12Yun-Hua Xu13Yun-Hua Xu14Yun-Hua Xu15Ying Huang16Ying Huang17Ying Huang18Ying Huang19Guo Wang20Guo Wang21Guo Wang22Guo Wang23Department of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaDepartment of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaDepartment of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaDepartment of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaDepartment of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaDepartment of Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, ChinaHunan Key Laboratory of Pharmacogenetics, Institute of Clinical Pharmacology, Central South University, Changsha, ChinaEngineering Research Center of Applied Technology of Pharmacogenomics, Ministry of Education, Changsha, ChinaNational Clinical Research Center for Geriatric Disorders, Central South University, Changsha, ChinaCoronin 2A (CORO2A) is a novel component of the N-CoR (nuclear receptor co-repressor) complex. Abnormal CORO2A expression is associated with carcinogenesis. We used databases from the Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO), and analyzed CORO2A expression and gene regulation networks in breast cancer. Expression was analyzed using GEO and TCGA database and further validated in breast cancer samples collected in our clinic. The prognostic value of CORO2A was explored by using the Kaplan–Meier survival analysis and Cox proportional hazards regression analysis. LinkedOmics was used to identify coexpressed genes associated with CORO2A. After analyzing the intersection of coexpressed genes correlated with CORO2A and differentially expressed genes after CORO2A silencing, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses of the intersecting genes were conducted by using FunRich software. Transwell assays were performed in breast cancer cells to determine the effect of CORO2A on cell migration. MTS, colony formation, and cell cycle distribution assays were performed in breast cancer cells to determine the effect of CORO2A on cell proliferation. Gene enrichment analysis was employed to explore the target networks of transcription factors and miRNAs. We found that CORO2A was upregulated and that the elevated expression of CORO2A was associated with poor overall survival (OS) and relapse-free survival (RFS) in TNBC patients. Further bioinformatics analysis of public sequencing data and our own RNA-Seq data revealed that CORO2A was probably involved in the epithelial-to-mesenchymal transition process and might have a significant effect on the migration of breast cancer cells, which might be mediated via pathways involving several miRNAs and MYC transcription factors. Functionally, the knockdown of CORO2A inhibited cell migration, decreased viability, and colony formation and induced cell cycle arrest in the G0/G1 phase in breast cancer cells. These results demonstrate that bioinformatics-based analysis efficiently reveals information about CORO2A expression and its potential regulatory networks in breast cancer, laying a foundation for further mechanistic research on the role of CORO2A in carcinogenesis. Moreover, CORO2A promotes the migration and proliferation of breast cancer cells and may have an important function in breast cancer progression. CORO2A is a potential prognostic predictor for TNBC patients. Targeting CORO2A may provide promising therapy strategies for breast cancer treatment.https://www.frontiersin.org/article/10.3389/fonc.2020.00916/fullCORO2Abreast cancermigrationproliferationprognosisregulatory network |