OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources

Outbreaks of COVID-19 caused by the novel coronavirus SARS-CoV-2 is still a threat to global human health. In order to understand the biology of SARS-CoV-2 and developing drug against COVID-19, a vast amount of genomic, proteomic, interatomic, and clinical data is being generated, and the bioinforma...

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Main Authors: Ahsan Md. Asif, Liu Yongjing, Feng Cong, Hofestädt Ralf, Chen Ming
Format: Article
Language:English
Published: De Gruyter 2021-03-01
Series:Journal of Integrative Bioinformatics
Subjects:
Online Access:https://doi.org/10.1515/jib-2020-0046
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spelling doaj-be580bab64e6421eb7aa5b773af18f8e2021-09-06T19:40:33ZengDe GruyterJournal of Integrative Bioinformatics1613-45162021-03-0118191710.1515/jib-2020-0046OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resourcesAhsan Md. Asif0Liu Yongjing1Feng Cong2Hofestädt Ralf3Chen Ming4Department of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou, 310058, ChinaDepartment of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou, 310058, ChinaDepartment of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou, 310058, ChinaBielefeld University, Faculty of Technology, Bioinformatics and Medical Informatics Department, Bielefeld, GermanyDepartment of Bioinformatics, College of Life Sciences, Zhejiang University, Hangzhou, 310058, ChinaOutbreaks of COVID-19 caused by the novel coronavirus SARS-CoV-2 is still a threat to global human health. In order to understand the biology of SARS-CoV-2 and developing drug against COVID-19, a vast amount of genomic, proteomic, interatomic, and clinical data is being generated, and the bioinformatics researchers produced databases, webservers and tools to gather those publicly available data and provide an opportunity of analyzing such data. However, these bioinformatics resources are scattered and researchers need to find them from different resources discretely. To facilitate researchers in finding the resources in one frame, we have developed an integrated web portal called OverCOVID (http://bis.zju.edu.cn/overcovid/). The publicly available webservers, databases and tools associated with SARS-CoV-2 have been incorporated in the resource page. In addition, a network view of the resources is provided to display the scope of the research. Other information like SARS-CoV-2 strains is visualized and various layers of interaction resources is listed in distinct pages of the web portal. As an integrative web portal, the OverCOVID will help the scientist to search the resources and accelerate the clinical research of SARS-CoV-2.https://doi.org/10.1515/jib-2020-0046bioinformatics resourcescoronaviruscovid-19sars-cov-2
collection DOAJ
language English
format Article
sources DOAJ
author Ahsan Md. Asif
Liu Yongjing
Feng Cong
Hofestädt Ralf
Chen Ming
spellingShingle Ahsan Md. Asif
Liu Yongjing
Feng Cong
Hofestädt Ralf
Chen Ming
OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
Journal of Integrative Bioinformatics
bioinformatics resources
coronavirus
covid-19
sars-cov-2
author_facet Ahsan Md. Asif
Liu Yongjing
Feng Cong
Hofestädt Ralf
Chen Ming
author_sort Ahsan Md. Asif
title OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
title_short OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
title_full OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
title_fullStr OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
title_full_unstemmed OverCOVID: an integrative web portal for SARS-CoV-2 bioinformatics resources
title_sort overcovid: an integrative web portal for sars-cov-2 bioinformatics resources
publisher De Gruyter
series Journal of Integrative Bioinformatics
issn 1613-4516
publishDate 2021-03-01
description Outbreaks of COVID-19 caused by the novel coronavirus SARS-CoV-2 is still a threat to global human health. In order to understand the biology of SARS-CoV-2 and developing drug against COVID-19, a vast amount of genomic, proteomic, interatomic, and clinical data is being generated, and the bioinformatics researchers produced databases, webservers and tools to gather those publicly available data and provide an opportunity of analyzing such data. However, these bioinformatics resources are scattered and researchers need to find them from different resources discretely. To facilitate researchers in finding the resources in one frame, we have developed an integrated web portal called OverCOVID (http://bis.zju.edu.cn/overcovid/). The publicly available webservers, databases and tools associated with SARS-CoV-2 have been incorporated in the resource page. In addition, a network view of the resources is provided to display the scope of the research. Other information like SARS-CoV-2 strains is visualized and various layers of interaction resources is listed in distinct pages of the web portal. As an integrative web portal, the OverCOVID will help the scientist to search the resources and accelerate the clinical research of SARS-CoV-2.
topic bioinformatics resources
coronavirus
covid-19
sars-cov-2
url https://doi.org/10.1515/jib-2020-0046
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