A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
Alpha-lactalbumin (α-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investiga...
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doaj-bda57e7f83d243288a9a5703e505d2022020-11-25T02:19:36ZengMDPI AGAnimals2076-26152019-12-011016010.3390/ani10010060ani10010060A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy CowsFan Yang0Manling Zhang1Yuewen Rong2Zaiqun Liu3Shuai Yang4Wei Zhang5Jun Li6Yafei Cai7College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaPhysical and chemical testing laboratory, Anji County Center for Food and Drug Control, Huzhou 313300, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaAlpha-lactalbumin (α-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investigate its polymorphisms and their relationship with milk lactation traits in Chinese Holstein dairy cows, single-strand conformation polymorphism method (PCR-SSCP) and direct sequencing method were used to mark the α-LA gene SNPs. AA (0.7402) and AB (0.2598) genotypes were screened out by PCR-SSCP bands analysis in two independent populations. Direct sequencing revealed that there is one SNP at 1847th (T/C) bp in noncoding region of α-LA gene with highly polymorphic (0.5 < PIC = 0.5623 or 0.5822), of which T is in AA genotype while C in AB. Association analysis also showed that lactose content (<i>p</i> < 0.05) was negatively correlated with fat and protein contents within subgroup, indicating that the SNPs (1847th, T/C) in α-LA gene could be used as a novel potential molecular marker for lactation traits in Chinese Holstein dairy cows.https://www.mdpi.com/2076-2615/10/1/60alpha-lactalbumin (α-la)pcr-sscpchinese holstein dairy cowssnpslactose |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Fan Yang Manling Zhang Yuewen Rong Zaiqun Liu Shuai Yang Wei Zhang Jun Li Yafei Cai |
spellingShingle |
Fan Yang Manling Zhang Yuewen Rong Zaiqun Liu Shuai Yang Wei Zhang Jun Li Yafei Cai A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows Animals alpha-lactalbumin (α-la) pcr-sscp chinese holstein dairy cows snps lactose |
author_facet |
Fan Yang Manling Zhang Yuewen Rong Zaiqun Liu Shuai Yang Wei Zhang Jun Li Yafei Cai |
author_sort |
Fan Yang |
title |
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows |
title_short |
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows |
title_full |
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows |
title_fullStr |
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows |
title_full_unstemmed |
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows |
title_sort |
novel snps in alpha-lactalbumin gene effects on lactation traits in chinese holstein dairy cows |
publisher |
MDPI AG |
series |
Animals |
issn |
2076-2615 |
publishDate |
2019-12-01 |
description |
Alpha-lactalbumin (α-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investigate its polymorphisms and their relationship with milk lactation traits in Chinese Holstein dairy cows, single-strand conformation polymorphism method (PCR-SSCP) and direct sequencing method were used to mark the α-LA gene SNPs. AA (0.7402) and AB (0.2598) genotypes were screened out by PCR-SSCP bands analysis in two independent populations. Direct sequencing revealed that there is one SNP at 1847th (T/C) bp in noncoding region of α-LA gene with highly polymorphic (0.5 < PIC = 0.5623 or 0.5822), of which T is in AA genotype while C in AB. Association analysis also showed that lactose content (<i>p</i> < 0.05) was negatively correlated with fat and protein contents within subgroup, indicating that the SNPs (1847th, T/C) in α-LA gene could be used as a novel potential molecular marker for lactation traits in Chinese Holstein dairy cows. |
topic |
alpha-lactalbumin (α-la) pcr-sscp chinese holstein dairy cows snps lactose |
url |
https://www.mdpi.com/2076-2615/10/1/60 |
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