A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows

Alpha-lactalbumin (α-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investiga...

Full description

Bibliographic Details
Main Authors: Fan Yang, Manling Zhang, Yuewen Rong, Zaiqun Liu, Shuai Yang, Wei Zhang, Jun Li, Yafei Cai
Format: Article
Language:English
Published: MDPI AG 2019-12-01
Series:Animals
Subjects:
Online Access:https://www.mdpi.com/2076-2615/10/1/60
id doaj-bda57e7f83d243288a9a5703e505d202
record_format Article
spelling doaj-bda57e7f83d243288a9a5703e505d2022020-11-25T02:19:36ZengMDPI AGAnimals2076-26152019-12-011016010.3390/ani10010060ani10010060A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy CowsFan Yang0Manling Zhang1Yuewen Rong2Zaiqun Liu3Shuai Yang4Wei Zhang5Jun Li6Yafei Cai7College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaPhysical and chemical testing laboratory, Anji County Center for Food and Drug Control, Huzhou 313300, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaCollege of Life Sciences, Anhui Provincial Key Lab of the Conservation and Exploitation of Biological Resources, Anhui Normal University, Wuhu 241000, ChinaCollege of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, ChinaAlpha-lactalbumin (&#945;-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investigate its polymorphisms and their relationship with milk lactation traits in Chinese Holstein dairy cows, single-strand conformation polymorphism method (PCR-SSCP) and direct sequencing method were used to mark the &#945;-LA gene SNPs. AA (0.7402) and AB (0.2598) genotypes were screened out by PCR-SSCP bands analysis in two independent populations. Direct sequencing revealed that there is one SNP at 1847th (T/C) bp in noncoding region of &#945;-LA gene with highly polymorphic (0.5 &lt; PIC = 0.5623 or 0.5822), of which T is in AA genotype while C in AB. Association analysis also showed that lactose content (<i>p</i> &lt; 0.05) was negatively correlated with fat and protein contents within subgroup, indicating that the SNPs (1847th, T/C) in &#945;-LA gene could be used as a novel potential molecular marker for lactation traits in Chinese Holstein dairy cows.https://www.mdpi.com/2076-2615/10/1/60alpha-lactalbumin (α-la)pcr-sscpchinese holstein dairy cowssnpslactose
collection DOAJ
language English
format Article
sources DOAJ
author Fan Yang
Manling Zhang
Yuewen Rong
Zaiqun Liu
Shuai Yang
Wei Zhang
Jun Li
Yafei Cai
spellingShingle Fan Yang
Manling Zhang
Yuewen Rong
Zaiqun Liu
Shuai Yang
Wei Zhang
Jun Li
Yafei Cai
A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
Animals
alpha-lactalbumin (α-la)
pcr-sscp
chinese holstein dairy cows
snps
lactose
author_facet Fan Yang
Manling Zhang
Yuewen Rong
Zaiqun Liu
Shuai Yang
Wei Zhang
Jun Li
Yafei Cai
author_sort Fan Yang
title A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
title_short A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
title_full A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
title_fullStr A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
title_full_unstemmed A Novel SNPs in Alpha-Lactalbumin Gene Effects on Lactation Traits in Chinese Holstein Dairy Cows
title_sort novel snps in alpha-lactalbumin gene effects on lactation traits in chinese holstein dairy cows
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2019-12-01
description Alpha-lactalbumin (&#945;-LA) is a major whey protein in bovine and other mammalian milk, which regulates synthesis of lactose. Little is known about its genetic polymorphism and whether can be used as a potential marker for dairy ingredients, milk yield traits, and milk properties. To investigate its polymorphisms and their relationship with milk lactation traits in Chinese Holstein dairy cows, single-strand conformation polymorphism method (PCR-SSCP) and direct sequencing method were used to mark the &#945;-LA gene SNPs. AA (0.7402) and AB (0.2598) genotypes were screened out by PCR-SSCP bands analysis in two independent populations. Direct sequencing revealed that there is one SNP at 1847th (T/C) bp in noncoding region of &#945;-LA gene with highly polymorphic (0.5 &lt; PIC = 0.5623 or 0.5822), of which T is in AA genotype while C in AB. Association analysis also showed that lactose content (<i>p</i> &lt; 0.05) was negatively correlated with fat and protein contents within subgroup, indicating that the SNPs (1847th, T/C) in &#945;-LA gene could be used as a novel potential molecular marker for lactation traits in Chinese Holstein dairy cows.
topic alpha-lactalbumin (α-la)
pcr-sscp
chinese holstein dairy cows
snps
lactose
url https://www.mdpi.com/2076-2615/10/1/60
work_keys_str_mv AT fanyang anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT manlingzhang anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT yuewenrong anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT zaiqunliu anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT shuaiyang anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT weizhang anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT junli anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT yafeicai anovelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT fanyang novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT manlingzhang novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT yuewenrong novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT zaiqunliu novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT shuaiyang novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT weizhang novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT junli novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
AT yafeicai novelsnpsinalphalactalbumingeneeffectsonlactationtraitsinchineseholsteindairycows
_version_ 1724875599057518592