MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images

Optical coherence tomography (OCT) is an optical high-resolution imaging technique for ophthalmic diagnosis. In this paper, we take advantages of multi-scale input, multi-scale side output and dual attention mechanism and present an enhanced nested U-Net architecture (MDAN-UNet), a new powerful full...

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Main Authors: Wen Liu, Yankui Sun, Qingge Ji
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Algorithms
Subjects:
Online Access:https://www.mdpi.com/1999-4893/13/3/60
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spelling doaj-bd16390bc5f24a919b6e1db19dab9e382020-11-25T02:23:47ZengMDPI AGAlgorithms1999-48932020-03-011336010.3390/a13030060a13030060MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography ImagesWen Liu0Yankui Sun1Qingge Ji2School of Data and Computer Science, Sun Yat-sen University, Guangzhou 510006, ChinaDepartment of Computer Science and Technology, Tsinghua University, 30 Shuangqing Road, Beijing 100084, ChinaSchool of Data and Computer Science, Sun Yat-sen University, Guangzhou 510006, ChinaOptical coherence tomography (OCT) is an optical high-resolution imaging technique for ophthalmic diagnosis. In this paper, we take advantages of multi-scale input, multi-scale side output and dual attention mechanism and present an enhanced nested U-Net architecture (MDAN-UNet), a new powerful fully convolutional network for automatic end-to-end segmentation of OCT images. We have evaluated two versions of MDAN-UNet (MDAN-UNet-16 and MDAN-UNet-32) on two publicly available benchmark datasets which are the Duke Diabetic Macular Edema (DME) dataset and the RETOUCH dataset, in comparison with other state-of-the-art segmentation methods. Our experiment demonstrates that MDAN-UNet-32 achieved the best performance, followed by MDAN-UNet-16 with smaller parameter, for multi-layer segmentation and multi-fluid segmentation respectively.https://www.mdpi.com/1999-4893/13/3/60optical coherence tomographyfully convolutional networklayer segmentationfluid segmentation
collection DOAJ
language English
format Article
sources DOAJ
author Wen Liu
Yankui Sun
Qingge Ji
spellingShingle Wen Liu
Yankui Sun
Qingge Ji
MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
Algorithms
optical coherence tomography
fully convolutional network
layer segmentation
fluid segmentation
author_facet Wen Liu
Yankui Sun
Qingge Ji
author_sort Wen Liu
title MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
title_short MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
title_full MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
title_fullStr MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
title_full_unstemmed MDAN-UNet: Multi-Scale and Dual Attention Enhanced Nested U-Net Architecture for Segmentation of Optical Coherence Tomography Images
title_sort mdan-unet: multi-scale and dual attention enhanced nested u-net architecture for segmentation of optical coherence tomography images
publisher MDPI AG
series Algorithms
issn 1999-4893
publishDate 2020-03-01
description Optical coherence tomography (OCT) is an optical high-resolution imaging technique for ophthalmic diagnosis. In this paper, we take advantages of multi-scale input, multi-scale side output and dual attention mechanism and present an enhanced nested U-Net architecture (MDAN-UNet), a new powerful fully convolutional network for automatic end-to-end segmentation of OCT images. We have evaluated two versions of MDAN-UNet (MDAN-UNet-16 and MDAN-UNet-32) on two publicly available benchmark datasets which are the Duke Diabetic Macular Edema (DME) dataset and the RETOUCH dataset, in comparison with other state-of-the-art segmentation methods. Our experiment demonstrates that MDAN-UNet-32 achieved the best performance, followed by MDAN-UNet-16 with smaller parameter, for multi-layer segmentation and multi-fluid segmentation respectively.
topic optical coherence tomography
fully convolutional network
layer segmentation
fluid segmentation
url https://www.mdpi.com/1999-4893/13/3/60
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AT yankuisun mdanunetmultiscaleanddualattentionenhancednestedunetarchitectureforsegmentationofopticalcoherencetomographyimages
AT qinggeji mdanunetmultiscaleanddualattentionenhancednestedunetarchitectureforsegmentationofopticalcoherencetomographyimages
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