A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops

Non-invasive determination of leaf nitrogen (N) and water contents is essential for ensuring the healthy growth of the plants. However, most of the existing methods to measure them are expensive. In this paper, a low-cost, portable multispectral sensor system is proposed to determine N and water con...

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Main Authors: Mohammad Habibullah, Mohammad Reza Mohebian, Raju Soolanayakanahally, Khan A. Wahid, Anh Dinh
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Sensors
Subjects:
Online Access:https://www.mdpi.com/1424-8220/20/5/1449
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spelling doaj-bce5fb7c88eb44ac881fa29a658a8c722020-11-24T21:51:50ZengMDPI AGSensors1424-82202020-03-01205144910.3390/s20051449s20051449A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in CropsMohammad Habibullah0Mohammad Reza Mohebian1Raju Soolanayakanahally2Khan A. Wahid3Anh Dinh4Department of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, CanadaDepartment of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, CanadaSaskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK S7N 0X2, CanadaDepartment of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, CanadaDepartment of Electrical and Computer Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, CanadaNon-invasive determination of leaf nitrogen (N) and water contents is essential for ensuring the healthy growth of the plants. However, most of the existing methods to measure them are expensive. In this paper, a low-cost, portable multispectral sensor system is proposed to determine N and water contents in the leaves, non-invasively. Four different species of plants&#8212;canola, corn, soybean, and wheat&#8212;are used as test plants to investigate the utility of the proposed device. The sensor system comprises two multispectral sensors, visible (VIS) and near-infrared (NIR), detecting reflectance at 12 wavelengths (six from each sensor). Two separate experiments were performed in a controlled greenhouse environment, including N and water experiments. Spectral data were collected from 307 leaves (121 for N and 186 for water experiment), and the rational quadratic Gaussian process regression (GPR) algorithm was applied to correlate the reflectance data with actual N and water content. By performing five-fold cross-validation, the N estimation showed a coefficient of determination (<inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula>) of 63.91% for canola, 80.05% for corn, 82.29% for soybean, and 63.21% for wheat. For water content estimation, canola showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 18.02%, corn showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 68.41%, soybean showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 46.38%, and wheat showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 64.58%. The result reveals that the proposed low-cost sensor with an appropriate regression model can be used to determine N content. However, further investigation is needed to improve the water estimation results using the proposed device.https://www.mdpi.com/1424-8220/20/5/1449non-invasivemachine learningleaf nitrogenreflectanceplant phenotyping
collection DOAJ
language English
format Article
sources DOAJ
author Mohammad Habibullah
Mohammad Reza Mohebian
Raju Soolanayakanahally
Khan A. Wahid
Anh Dinh
spellingShingle Mohammad Habibullah
Mohammad Reza Mohebian
Raju Soolanayakanahally
Khan A. Wahid
Anh Dinh
A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
Sensors
non-invasive
machine learning
leaf nitrogen
reflectance
plant phenotyping
author_facet Mohammad Habibullah
Mohammad Reza Mohebian
Raju Soolanayakanahally
Khan A. Wahid
Anh Dinh
author_sort Mohammad Habibullah
title A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
title_short A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
title_full A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
title_fullStr A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
title_full_unstemmed A Cost-Effective and Portable Optical Sensor System to Estimate Leaf Nitrogen and Water Contents in Crops
title_sort cost-effective and portable optical sensor system to estimate leaf nitrogen and water contents in crops
publisher MDPI AG
series Sensors
issn 1424-8220
publishDate 2020-03-01
description Non-invasive determination of leaf nitrogen (N) and water contents is essential for ensuring the healthy growth of the plants. However, most of the existing methods to measure them are expensive. In this paper, a low-cost, portable multispectral sensor system is proposed to determine N and water contents in the leaves, non-invasively. Four different species of plants&#8212;canola, corn, soybean, and wheat&#8212;are used as test plants to investigate the utility of the proposed device. The sensor system comprises two multispectral sensors, visible (VIS) and near-infrared (NIR), detecting reflectance at 12 wavelengths (six from each sensor). Two separate experiments were performed in a controlled greenhouse environment, including N and water experiments. Spectral data were collected from 307 leaves (121 for N and 186 for water experiment), and the rational quadratic Gaussian process regression (GPR) algorithm was applied to correlate the reflectance data with actual N and water content. By performing five-fold cross-validation, the N estimation showed a coefficient of determination (<inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula>) of 63.91% for canola, 80.05% for corn, 82.29% for soybean, and 63.21% for wheat. For water content estimation, canola showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 18.02%, corn showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 68.41%, soybean showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 46.38%, and wheat showed an <inline-formula> <math display="inline"> <semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics> </math> </inline-formula> of 64.58%. The result reveals that the proposed low-cost sensor with an appropriate regression model can be used to determine N content. However, further investigation is needed to improve the water estimation results using the proposed device.
topic non-invasive
machine learning
leaf nitrogen
reflectance
plant phenotyping
url https://www.mdpi.com/1424-8220/20/5/1449
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