Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes

Background and Aim: Different phenotypic methods are available for identification of pseudomonas aeroginosa isolates producing carbapenemase enzymes. Carbapenem inactivation method (CIM) is a fast and inexpensive way for detection of this enzyme. The purpose of this study was to evaluate the CIM...

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Main Authors: Beig M, Arabestani MR
Format: Article
Language:fas
Published: Kurdistan University of Medical Sciences 2019-10-01
Series:مجله علمی دانشگاه علوم پزشکی کردستان
Subjects:
pcr
cim
Online Access:http://sjku.muk.ac.ir/article-1-4770-en.pdf
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spelling doaj-bb17462dbb9c4511834be2f34e86c4f02020-11-25T02:09:58Zfas Kurdistan University of Medical Sciencesمجله علمی دانشگاه علوم پزشکی کردستان1560-652X2345-40402019-10-01244103115Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymesBeig M0https://orcid.org/0000-0003-1243-3164Arabestani MR1https://orcid.org/0000-0001-9991-8193MSc of Medical Microbiology, Depatment of Medical Microbioloy, Faculty of Medicine, Hamadan University of Medical Sciences, Hamadan, IranAssociate Professor of Medical Bacteriology, Brucellosis Research Center, Hamadan University of Medical Sciences, Hamadan, IranBackground and Aim: Different phenotypic methods are available for identification of pseudomonas aeroginosa isolates producing carbapenemase enzymes. Carbapenem inactivation method (CIM) is a fast and inexpensive way for detection of this enzyme. The purpose of this study was to evaluate the CIM method for accurate identification of carbapenemase producing pseudomonas aeruginosa isolates. Materials and Methods: A total of 97 clinical specimens were collected from the patients in the hospitals of Hamadan from November 2017 to May 2018, in Iran. Antibiotic susceptibility test was performed by disc diffusion method. Minimum inhibitory concentration (MIC) for imipenem was measured by E-test. Then, CIM test and polymerase chain reaction (PCR) methods were performed. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of the CIM test were calculated for each of the genes. Using SPSS16 software, significance of CIM test was evaluated by chi-square test (X2). Results: In this study, the highest and lowest levels of resistance belonged to cefoxitin 91 (93.8%) and piperacilin/tazobactam 38 (39.2%). Among 97 P. aeruginosa clinical isolates, 49 (50.51%) were carbapenemase producer with positive results for CIM test in 44 (89.7%) isolates, and negative results for CIM test in 48 (49.48%) isolates. Therefore, the sensitivity and specificity of the CIM test were 90% and 100%, respectively. Conclusions: According to the results of this study CIM method is an inexpensive test which can be easily performed and has high sensitivity and specificity for identification of carbapenemase producing P. aeruginosa isolates.http://sjku.muk.ac.ir/article-1-4770-en.pdfpseudomonas aeruginosapcrcim
collection DOAJ
language fas
format Article
sources DOAJ
author Beig M
Arabestani MR
spellingShingle Beig M
Arabestani MR
Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
مجله علمی دانشگاه علوم پزشکی کردستان
pseudomonas aeruginosa
pcr
cim
author_facet Beig M
Arabestani MR
author_sort Beig M
title Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
title_short Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
title_full Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
title_fullStr Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
title_full_unstemmed Evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
title_sort evaluation of carbapenem inactivation method for accurate detection of pseudomonas aeroginosa isolates producing carbapenemase enzymes
publisher Kurdistan University of Medical Sciences
series مجله علمی دانشگاه علوم پزشکی کردستان
issn 1560-652X
2345-4040
publishDate 2019-10-01
description Background and Aim: Different phenotypic methods are available for identification of pseudomonas aeroginosa isolates producing carbapenemase enzymes. Carbapenem inactivation method (CIM) is a fast and inexpensive way for detection of this enzyme. The purpose of this study was to evaluate the CIM method for accurate identification of carbapenemase producing pseudomonas aeruginosa isolates. Materials and Methods: A total of 97 clinical specimens were collected from the patients in the hospitals of Hamadan from November 2017 to May 2018, in Iran. Antibiotic susceptibility test was performed by disc diffusion method. Minimum inhibitory concentration (MIC) for imipenem was measured by E-test. Then, CIM test and polymerase chain reaction (PCR) methods were performed. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) of the CIM test were calculated for each of the genes. Using SPSS16 software, significance of CIM test was evaluated by chi-square test (X2). Results: In this study, the highest and lowest levels of resistance belonged to cefoxitin 91 (93.8%) and piperacilin/tazobactam 38 (39.2%). Among 97 P. aeruginosa clinical isolates, 49 (50.51%) were carbapenemase producer with positive results for CIM test in 44 (89.7%) isolates, and negative results for CIM test in 48 (49.48%) isolates. Therefore, the sensitivity and specificity of the CIM test were 90% and 100%, respectively. Conclusions: According to the results of this study CIM method is an inexpensive test which can be easily performed and has high sensitivity and specificity for identification of carbapenemase producing P. aeruginosa isolates.
topic pseudomonas aeruginosa
pcr
cim
url http://sjku.muk.ac.ir/article-1-4770-en.pdf
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