Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India

Mutation at codon 315 of katG gene is the major cause for isoniazid (INH) resistance in Mycobacterium tuberculosis (M. tuberculosis). Substitution at codon 315 of katG gene was analyzed in 85 phenotypically resistant isolates collected from various parts of southern India by direct sequencing method...

Full description

Bibliographic Details
Main Authors: A. Nusrath Unissa, N. Selvakumar, Sujatha Narayanan, C. Suganthi, L. E. Hanna
Format: Article
Language:English
Published: Hindawi Limited 2015-01-01
Series:BioMed Research International
Online Access:http://dx.doi.org/10.1155/2015/257983
id doaj-ba7b8b23885a497fa9c6f08db10aa286
record_format Article
spelling doaj-ba7b8b23885a497fa9c6f08db10aa2862020-11-24T22:56:58ZengHindawi LimitedBioMed Research International2314-61332314-61412015-01-01201510.1155/2015/257983257983Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South IndiaA. Nusrath Unissa0N. Selvakumar1Sujatha Narayanan2C. Suganthi3L. E. Hanna4Division of Biomedical Informatics, Department of Clinical Research, National Institute for Research in Tuberculosis (NIRT), Indian Council of Medical Research (ICMR), No. 1 Mayor Sathyamoorthy Road, Chetput, Chennai, Tamil Nadu 600 031, IndiaDivision of Biomedical Informatics, Department of Clinical Research, National Institute for Research in Tuberculosis (NIRT), Indian Council of Medical Research (ICMR), No. 1 Mayor Sathyamoorthy Road, Chetput, Chennai, Tamil Nadu 600 031, IndiaDivision of Biomedical Informatics, Department of Clinical Research, National Institute for Research in Tuberculosis (NIRT), Indian Council of Medical Research (ICMR), No. 1 Mayor Sathyamoorthy Road, Chetput, Chennai, Tamil Nadu 600 031, IndiaDivision of Biomedical Informatics, Department of Clinical Research, National Institute for Research in Tuberculosis (NIRT), Indian Council of Medical Research (ICMR), No. 1 Mayor Sathyamoorthy Road, Chetput, Chennai, Tamil Nadu 600 031, IndiaDivision of Biomedical Informatics, Department of Clinical Research, National Institute for Research in Tuberculosis (NIRT), Indian Council of Medical Research (ICMR), No. 1 Mayor Sathyamoorthy Road, Chetput, Chennai, Tamil Nadu 600 031, IndiaMutation at codon 315 of katG gene is the major cause for isoniazid (INH) resistance in Mycobacterium tuberculosis (M. tuberculosis). Substitution at codon 315 of katG gene was analyzed in 85 phenotypically resistant isolates collected from various parts of southern India by direct sequencing method. The obtained results were interpreted in the context of minimum inhibitory concentration (MIC) of INH. Of the 85 phenotypically resistant isolates, 56 (66%) were also correlated by the presence of resistance mutations in the katG gene; 47 of these isolates had ACC, 6 had AAC, 2 had ATC, and one had CGC codon. The frequency of Ser315 substitution in katG gene was found to be higher (70%) amongst multidrug-resistant (MDR) strains than among non-MDR (61%) INH-resistant isolates. Further, the frequency of mutations was found to be greater (74%) in isolates with higher MIC values in contrast to those isolates with low MIC values (58%). Therefore, the study identified high prevalence of Ser315Thr substitution in katG gene of INH-resistant isolates from south India. Also, isolates harboring this substitution were found to be associated with multidrug and high level INH resistance.http://dx.doi.org/10.1155/2015/257983
collection DOAJ
language English
format Article
sources DOAJ
author A. Nusrath Unissa
N. Selvakumar
Sujatha Narayanan
C. Suganthi
L. E. Hanna
spellingShingle A. Nusrath Unissa
N. Selvakumar
Sujatha Narayanan
C. Suganthi
L. E. Hanna
Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
BioMed Research International
author_facet A. Nusrath Unissa
N. Selvakumar
Sujatha Narayanan
C. Suganthi
L. E. Hanna
author_sort A. Nusrath Unissa
title Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
title_short Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
title_full Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
title_fullStr Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
title_full_unstemmed Investigation of Ser315 Substitutions within katG Gene in Isoniazid-Resistant Clinical Isolates of Mycobacterium tuberculosis from South India
title_sort investigation of ser315 substitutions within katg gene in isoniazid-resistant clinical isolates of mycobacterium tuberculosis from south india
publisher Hindawi Limited
series BioMed Research International
issn 2314-6133
2314-6141
publishDate 2015-01-01
description Mutation at codon 315 of katG gene is the major cause for isoniazid (INH) resistance in Mycobacterium tuberculosis (M. tuberculosis). Substitution at codon 315 of katG gene was analyzed in 85 phenotypically resistant isolates collected from various parts of southern India by direct sequencing method. The obtained results were interpreted in the context of minimum inhibitory concentration (MIC) of INH. Of the 85 phenotypically resistant isolates, 56 (66%) were also correlated by the presence of resistance mutations in the katG gene; 47 of these isolates had ACC, 6 had AAC, 2 had ATC, and one had CGC codon. The frequency of Ser315 substitution in katG gene was found to be higher (70%) amongst multidrug-resistant (MDR) strains than among non-MDR (61%) INH-resistant isolates. Further, the frequency of mutations was found to be greater (74%) in isolates with higher MIC values in contrast to those isolates with low MIC values (58%). Therefore, the study identified high prevalence of Ser315Thr substitution in katG gene of INH-resistant isolates from south India. Also, isolates harboring this substitution were found to be associated with multidrug and high level INH resistance.
url http://dx.doi.org/10.1155/2015/257983
work_keys_str_mv AT anusrathunissa investigationofser315substitutionswithinkatggeneinisoniazidresistantclinicalisolatesofmycobacteriumtuberculosisfromsouthindia
AT nselvakumar investigationofser315substitutionswithinkatggeneinisoniazidresistantclinicalisolatesofmycobacteriumtuberculosisfromsouthindia
AT sujathanarayanan investigationofser315substitutionswithinkatggeneinisoniazidresistantclinicalisolatesofmycobacteriumtuberculosisfromsouthindia
AT csuganthi investigationofser315substitutionswithinkatggeneinisoniazidresistantclinicalisolatesofmycobacteriumtuberculosisfromsouthindia
AT lehanna investigationofser315substitutionswithinkatggeneinisoniazidresistantclinicalisolatesofmycobacteriumtuberculosisfromsouthindia
_version_ 1725652626624741376