Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families
Abstract Congenital cataract is the most frequent inherited ocular disorder and the most leading cause of lifelong visual loss. The screening of pathogenic mutations can be very challenging in some cases, for congenital cataracts are clinically and genetically heterogeneous diseases. The aim of this...
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doaj-b91ec7334f13432abe52e7c4701bfb5d2020-12-08T00:41:25ZengNature Publishing GroupScientific Reports2045-23222017-04-01711910.1038/s41598-017-01182-9Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han FamiliesYi Zhai0Jinyu Li1Wangshu Yu2Sha Zhu3Yinhui Yu4Menghan Wu5Guizhen Sun6Xiaohua Gong7Ke Yao8Eye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityEye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityThe 117th hospital of PLAEye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityEye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityEye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityNaval Convalescent Zone of Hangzhou Sanatorium, Nanjing Military Command, CPLASchool of Optometry and Vision Science Program, University of CaliforniaEye Center, Second Affiliated Hospital of Medical College, Zhejiang UniversityAbstract Congenital cataract is the most frequent inherited ocular disorder and the most leading cause of lifelong visual loss. The screening of pathogenic mutations can be very challenging in some cases, for congenital cataracts are clinically and genetically heterogeneous diseases. The aim of this study is to investigate the mutation spectrum and frequency of 54 cartaract-associated genes in 27 Chinese families with congenital cataracts. Variants in 54 cataract-associated genes were screened by targeted next-generation sequencing (NGS) and then validated by Sanger sequencing. We identified pathogenic variants in 62.96% (17/27) of families, and over 52.94% (9/17) of these variants were novel. Among them, three are splicing site mutations, four are nonsense mutations, seven are missense mutations, two are frame shift mutations and one is intronic mutation. This included identification of: complex ocular phenotypes due to two novel PAX6 mutations; progressive cortical cataract and lamellar cataract with lens subluxation due to two novel CRYGS mutations. Mutations were also found in rarely reported genes including CRYBA4, CRYBA2, BFSP1, VIM, HSF4, and EZR. Our study expands the mutation spectrum and frequency of genes responsible for congenital cataracts. Targeted next-generation sequencing in inherited congenital cataract patients provided significant diagnostic information.https://doi.org/10.1038/s41598-017-01182-9 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yi Zhai Jinyu Li Wangshu Yu Sha Zhu Yinhui Yu Menghan Wu Guizhen Sun Xiaohua Gong Ke Yao |
spellingShingle |
Yi Zhai Jinyu Li Wangshu Yu Sha Zhu Yinhui Yu Menghan Wu Guizhen Sun Xiaohua Gong Ke Yao Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families Scientific Reports |
author_facet |
Yi Zhai Jinyu Li Wangshu Yu Sha Zhu Yinhui Yu Menghan Wu Guizhen Sun Xiaohua Gong Ke Yao |
author_sort |
Yi Zhai |
title |
Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families |
title_short |
Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families |
title_full |
Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families |
title_fullStr |
Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families |
title_full_unstemmed |
Targeted Exome Sequencing of Congenital Cataracts Related Genes: Broadening the Mutation Spectrum and Genotype–Phenotype Correlations in 27 Chinese Han Families |
title_sort |
targeted exome sequencing of congenital cataracts related genes: broadening the mutation spectrum and genotype–phenotype correlations in 27 chinese han families |
publisher |
Nature Publishing Group |
series |
Scientific Reports |
issn |
2045-2322 |
publishDate |
2017-04-01 |
description |
Abstract Congenital cataract is the most frequent inherited ocular disorder and the most leading cause of lifelong visual loss. The screening of pathogenic mutations can be very challenging in some cases, for congenital cataracts are clinically and genetically heterogeneous diseases. The aim of this study is to investigate the mutation spectrum and frequency of 54 cartaract-associated genes in 27 Chinese families with congenital cataracts. Variants in 54 cataract-associated genes were screened by targeted next-generation sequencing (NGS) and then validated by Sanger sequencing. We identified pathogenic variants in 62.96% (17/27) of families, and over 52.94% (9/17) of these variants were novel. Among them, three are splicing site mutations, four are nonsense mutations, seven are missense mutations, two are frame shift mutations and one is intronic mutation. This included identification of: complex ocular phenotypes due to two novel PAX6 mutations; progressive cortical cataract and lamellar cataract with lens subluxation due to two novel CRYGS mutations. Mutations were also found in rarely reported genes including CRYBA4, CRYBA2, BFSP1, VIM, HSF4, and EZR. Our study expands the mutation spectrum and frequency of genes responsible for congenital cataracts. Targeted next-generation sequencing in inherited congenital cataract patients provided significant diagnostic information. |
url |
https://doi.org/10.1038/s41598-017-01182-9 |
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