Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation

Cup-to-disc ratio (CDR) is of great importance during assessing structural changes at the optic nerve head (ONH) and diagnosis of glaucoma. While most efforts have been put on acquiring the CDR number through CNN-based segmentation algorithms followed by the calculation of CDR, these methods usually...

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Main Authors: Shuo Li, Chiru Ge, Xiaodan Sui, Yuanjie Zheng, Weikuan Jia
Format: Article
Language:English
Published: MDPI AG 2020-05-01
Series:Electronics
Subjects:
Online Access:https://www.mdpi.com/2079-9292/9/6/909
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spelling doaj-b7fa9c8486954927b8c107846c734eb62020-11-25T02:33:30ZengMDPI AGElectronics2079-92922020-05-01990990910.3390/electronics9060909Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio EstimationShuo Li0Chiru Ge1Xiaodan Sui2Yuanjie Zheng3Weikuan Jia4School of Information Science and Engineering, Shandong Normal University, Jinan 250358, ChinaSchool of Information Science and Engineering, Shandong Normal University, Jinan 250358, ChinaSchool of Information Science and Engineering, Shandong Normal University, Jinan 250358, ChinaSchool of Information Science and Engineering, Shandong Normal University, Jinan 250358, ChinaSchool of Information Science and Engineering, Shandong Normal University, Jinan 250358, ChinaCup-to-disc ratio (CDR) is of great importance during assessing structural changes at the optic nerve head (ONH) and diagnosis of glaucoma. While most efforts have been put on acquiring the CDR number through CNN-based segmentation algorithms followed by the calculation of CDR, these methods usually only focus on the features in the convolution kernel, which is, after all, the operation of the local region, ignoring the contribution of rich global features (such as distant pixels) to the current features. In this paper, a new end-to-end channel and spatial attention regression deep learning network is proposed to deduces CDR number from the regression perspective and combine the self-attention mechanism with the regression network. Our network consists of four modules: the feature extraction module to extract deep features expressing the complicated pattern of optic disc (OD) and optic cup (OC), the attention module including the channel attention block (CAB) and the spatial attention block (SAB) to improve feature representation by aggregating long-range contextual information, the regression module to deduce CDR number directly, and the segmentation-auxiliary module to focus the model’s attention on the relevant features instead of the background region. Especially, the CAB selects relatively important feature maps in channel dimension, shifting the emphasis on the OD and OC region; meanwhile, the SAB learns the discriminative ability of feature representation at pixel level by capturing the relationship of intra-feature map. The experimental results of ORIGA dataset show that our method obtains absolute CDR error of 0.067 and the Pearson’s correlation coefficient of 0.694 in estimating CDR and our method has a great potential in predicting the CDR number.https://www.mdpi.com/2079-9292/9/6/909joint OD and OC segmentationcup-to-disc ratio estimationself-attention mechanismglaucoma screening
collection DOAJ
language English
format Article
sources DOAJ
author Shuo Li
Chiru Ge
Xiaodan Sui
Yuanjie Zheng
Weikuan Jia
spellingShingle Shuo Li
Chiru Ge
Xiaodan Sui
Yuanjie Zheng
Weikuan Jia
Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
Electronics
joint OD and OC segmentation
cup-to-disc ratio estimation
self-attention mechanism
glaucoma screening
author_facet Shuo Li
Chiru Ge
Xiaodan Sui
Yuanjie Zheng
Weikuan Jia
author_sort Shuo Li
title Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
title_short Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
title_full Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
title_fullStr Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
title_full_unstemmed Channel and Spatial Attention Regression Network for Cup-to-Disc Ratio Estimation
title_sort channel and spatial attention regression network for cup-to-disc ratio estimation
publisher MDPI AG
series Electronics
issn 2079-9292
publishDate 2020-05-01
description Cup-to-disc ratio (CDR) is of great importance during assessing structural changes at the optic nerve head (ONH) and diagnosis of glaucoma. While most efforts have been put on acquiring the CDR number through CNN-based segmentation algorithms followed by the calculation of CDR, these methods usually only focus on the features in the convolution kernel, which is, after all, the operation of the local region, ignoring the contribution of rich global features (such as distant pixels) to the current features. In this paper, a new end-to-end channel and spatial attention regression deep learning network is proposed to deduces CDR number from the regression perspective and combine the self-attention mechanism with the regression network. Our network consists of four modules: the feature extraction module to extract deep features expressing the complicated pattern of optic disc (OD) and optic cup (OC), the attention module including the channel attention block (CAB) and the spatial attention block (SAB) to improve feature representation by aggregating long-range contextual information, the regression module to deduce CDR number directly, and the segmentation-auxiliary module to focus the model’s attention on the relevant features instead of the background region. Especially, the CAB selects relatively important feature maps in channel dimension, shifting the emphasis on the OD and OC region; meanwhile, the SAB learns the discriminative ability of feature representation at pixel level by capturing the relationship of intra-feature map. The experimental results of ORIGA dataset show that our method obtains absolute CDR error of 0.067 and the Pearson’s correlation coefficient of 0.694 in estimating CDR and our method has a great potential in predicting the CDR number.
topic joint OD and OC segmentation
cup-to-disc ratio estimation
self-attention mechanism
glaucoma screening
url https://www.mdpi.com/2079-9292/9/6/909
work_keys_str_mv AT shuoli channelandspatialattentionregressionnetworkforcuptodiscratioestimation
AT chiruge channelandspatialattentionregressionnetworkforcuptodiscratioestimation
AT xiaodansui channelandspatialattentionregressionnetworkforcuptodiscratioestimation
AT yuanjiezheng channelandspatialattentionregressionnetworkforcuptodiscratioestimation
AT weikuanjia channelandspatialattentionregressionnetworkforcuptodiscratioestimation
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