The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis.
Soil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity re...
Main Authors: | , , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2016-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC5035014?pdf=render |
id |
doaj-b5c6e9169c65462d978a565353df1fde |
---|---|
record_format |
Article |
spelling |
doaj-b5c6e9169c65462d978a565353df1fde2020-11-25T02:23:09ZengPublic Library of Science (PLoS)PLoS ONE1932-62032016-01-01119e016255610.1371/journal.pone.0162556The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis.Jiongming SuiDefeng JiangDandan ZhangXiaojun SongJingshan WangMingxia ZhaoLixian QiaoSoil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity resistance under salinity stress, digital gene expression (DGE) sequencing was performed in the leaves of salinity-resistant mutant (S2) and Huayu20 as control (S4) under salt stress. The results indicate that major transcription factor families linked to salinity stress responses (NAC, bHLH, WRKY, AP2/ERF) are differentially expressed in the leaves of peanut under salinity stress. In addition, genes related to cell wall loosening and stiffening (xyloglucan endotransglucosylase/hydrolases, peroxidases, lipid transfer protein, expansin, extension), late embryogenesis abundant protein family, fatty acid biosynthesis and metabolism (13-lipoxygenase omega-6 fatty acid desaturase, omega-3 fatty acid desaturase) and some previously reported stress-related genes encoding proteins such as defensin, universal stress protein, metallothionein, peroxidase etc, and some other known or unknown function stress related genes, have been identified. The information from this study will be useful for further research on the mechanism of salinity resistance and will provide a useful genomic resource for the breeding of salinity resistance variety in peanut.http://europepmc.org/articles/PMC5035014?pdf=render |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jiongming Sui Defeng Jiang Dandan Zhang Xiaojun Song Jingshan Wang Mingxia Zhao Lixian Qiao |
spellingShingle |
Jiongming Sui Defeng Jiang Dandan Zhang Xiaojun Song Jingshan Wang Mingxia Zhao Lixian Qiao The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. PLoS ONE |
author_facet |
Jiongming Sui Defeng Jiang Dandan Zhang Xiaojun Song Jingshan Wang Mingxia Zhao Lixian Qiao |
author_sort |
Jiongming Sui |
title |
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. |
title_short |
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. |
title_full |
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. |
title_fullStr |
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. |
title_full_unstemmed |
The Salinity Responsive Mechanism of a Hydroxyproline-Tolerant Mutant of Peanut Based on Digital Gene Expression Profiling Analysis. |
title_sort |
salinity responsive mechanism of a hydroxyproline-tolerant mutant of peanut based on digital gene expression profiling analysis. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2016-01-01 |
description |
Soil salinity seriously limits plant growth and yield. Strategies have been developed for plants to cope with various environmental stresses during evolution. To screen for the broad-spectrum genes and the molecular mechanism about a hydroxyproline-tolerant mutant of peanut with enhanced salinity resistance under salinity stress, digital gene expression (DGE) sequencing was performed in the leaves of salinity-resistant mutant (S2) and Huayu20 as control (S4) under salt stress. The results indicate that major transcription factor families linked to salinity stress responses (NAC, bHLH, WRKY, AP2/ERF) are differentially expressed in the leaves of peanut under salinity stress. In addition, genes related to cell wall loosening and stiffening (xyloglucan endotransglucosylase/hydrolases, peroxidases, lipid transfer protein, expansin, extension), late embryogenesis abundant protein family, fatty acid biosynthesis and metabolism (13-lipoxygenase omega-6 fatty acid desaturase, omega-3 fatty acid desaturase) and some previously reported stress-related genes encoding proteins such as defensin, universal stress protein, metallothionein, peroxidase etc, and some other known or unknown function stress related genes, have been identified. The information from this study will be useful for further research on the mechanism of salinity resistance and will provide a useful genomic resource for the breeding of salinity resistance variety in peanut. |
url |
http://europepmc.org/articles/PMC5035014?pdf=render |
work_keys_str_mv |
AT jiongmingsui thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT defengjiang thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT dandanzhang thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT xiaojunsong thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT jingshanwang thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT mingxiazhao thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT lixianqiao thesalinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT jiongmingsui salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT defengjiang salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT dandanzhang salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT xiaojunsong salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT jingshanwang salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT mingxiazhao salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis AT lixianqiao salinityresponsivemechanismofahydroxyprolinetolerantmutantofpeanutbasedondigitalgeneexpressionprofilinganalysis |
_version_ |
1724859387665711104 |