Automated calculation and convergence of defect transport tensors

Abstract Defect diffusion is a key process in materials science and catalysis, but as migration mechanisms are often too complex to enumerate a priori, calculation of transport tensors typically have no measure of convergence and require significant end-user intervention. These two bottlenecks preve...

Full description

Bibliographic Details
Main Authors: Thomas D. Swinburne, Danny Perez
Format: Article
Language:English
Published: Nature Publishing Group 2020-12-01
Series:npj Computational Materials
Online Access:https://doi.org/10.1038/s41524-020-00463-8
id doaj-b43319cc531a461c817636df06ce17aa
record_format Article
spelling doaj-b43319cc531a461c817636df06ce17aa2020-12-13T12:15:54ZengNature Publishing Groupnpj Computational Materials2057-39602020-12-01611710.1038/s41524-020-00463-8Automated calculation and convergence of defect transport tensorsThomas D. Swinburne0Danny Perez1Aix-Marseille Université, CNRSTheoretical Division T-1, Los Alamos National LaboratoryAbstract Defect diffusion is a key process in materials science and catalysis, but as migration mechanisms are often too complex to enumerate a priori, calculation of transport tensors typically have no measure of convergence and require significant end-user intervention. These two bottlenecks prevent high-throughput implementations essential to propagate model-form uncertainty from interatomic interactions to predictive simulations. In order to address these issues, we extend a massively parallel accelerated sampling scheme, autonomously controlled by Bayesian estimators of statewide sampling completeness, to build atomistic kinetic Monte Carlo models on a state-space irreducible under exchange and space group symmetries. Focusing on isolated defects, we derive analytic expressions for drift and diffusion coefficients, providing a convergence metric by calculating the Kullback–Leibler divergence across the ensemble of diffusion processes consistent with the sampling uncertainty. The autonomy and efficacy of the method is demonstrated on surface trimers in tungsten and Hexa-interstitials in magnesium oxide, both of which exhibit complex, correlated migration mechanisms.https://doi.org/10.1038/s41524-020-00463-8
collection DOAJ
language English
format Article
sources DOAJ
author Thomas D. Swinburne
Danny Perez
spellingShingle Thomas D. Swinburne
Danny Perez
Automated calculation and convergence of defect transport tensors
npj Computational Materials
author_facet Thomas D. Swinburne
Danny Perez
author_sort Thomas D. Swinburne
title Automated calculation and convergence of defect transport tensors
title_short Automated calculation and convergence of defect transport tensors
title_full Automated calculation and convergence of defect transport tensors
title_fullStr Automated calculation and convergence of defect transport tensors
title_full_unstemmed Automated calculation and convergence of defect transport tensors
title_sort automated calculation and convergence of defect transport tensors
publisher Nature Publishing Group
series npj Computational Materials
issn 2057-3960
publishDate 2020-12-01
description Abstract Defect diffusion is a key process in materials science and catalysis, but as migration mechanisms are often too complex to enumerate a priori, calculation of transport tensors typically have no measure of convergence and require significant end-user intervention. These two bottlenecks prevent high-throughput implementations essential to propagate model-form uncertainty from interatomic interactions to predictive simulations. In order to address these issues, we extend a massively parallel accelerated sampling scheme, autonomously controlled by Bayesian estimators of statewide sampling completeness, to build atomistic kinetic Monte Carlo models on a state-space irreducible under exchange and space group symmetries. Focusing on isolated defects, we derive analytic expressions for drift and diffusion coefficients, providing a convergence metric by calculating the Kullback–Leibler divergence across the ensemble of diffusion processes consistent with the sampling uncertainty. The autonomy and efficacy of the method is demonstrated on surface trimers in tungsten and Hexa-interstitials in magnesium oxide, both of which exhibit complex, correlated migration mechanisms.
url https://doi.org/10.1038/s41524-020-00463-8
work_keys_str_mv AT thomasdswinburne automatedcalculationandconvergenceofdefecttransporttensors
AT dannyperez automatedcalculationandconvergenceofdefecttransporttensors
_version_ 1724385074459181056