Software Benchmark—Classification Tree Algorithms for Cell Atlases Annotation Using Single-Cell RNA-Sequencing Data

Software Benchmark—Classification Tree Algorithms for Cell Atlases Annotation Using Single-Cell RNA-Sequencing Data

Classification tree is a widely used machine learning method. It has multiple implementations as R packages; rpart, ctree, evtree, tree and C5.0. The details of these implementations are not the same, and hence their performances differ from one application to another. We are interested in their per...

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Bibliographic Details
Main Authors: Omar Alaqeeli, Li Xing, Xuekui Zhang
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Microbiology Research
Subjects:
classification tree
single-cell RNA-Sequencing
benchmark
precision
recall
<i>F</i>1-score
Online Access:https://www.mdpi.com/2036-7481/12/2/22

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https://www.mdpi.com/2036-7481/12/2/22

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