Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq

This study was conducted to identify genetic genotype patterns for the species Lophochloa berythea (Boiss. et Blanche) Bor, L. obtusiflora (Boiss.) Gontsch., L. phleoides (Vill.) Rchb., L. pumila (Desf.) Bor, Schismus arabicus Nees. and S. barbatus (L.) Thell. from family Poaceae in Iraq by using po...

Full description

Bibliographic Details
Main Authors: Aboothar Ha. Al-Edhari, Shaymaʼa Ma. Al Regawi, Abdullah Sh. Sardar
Format: Article
Language:English
Published: Salahaddin University-Erbil 2019-10-01
Series:Zanco Journal of Pure and Applied Sciences
Subjects:
Online Access:https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3303
id doaj-b09b496c50eb40cfbfa0b294382fa848
record_format Article
spelling doaj-b09b496c50eb40cfbfa0b294382fa8482020-11-25T01:39:00ZengSalahaddin University-ErbilZanco Journal of Pure and Applied Sciences2412-39862218-02302019-10-0131s413814210.21271/zjpas.31.s4.22Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in IraqAboothar Ha. Al-Edhari0Shaymaʼa Ma. Al Regawi1Abdullah Sh. Sardar2Department of Ecology, College of Science, University of Kufa, Najaf, IraqDepartment of Biology, College of Sciences, University of Kufa, Najaf, IraqDepartment of Biology, College of Education, Salahaddin University-Erbil, Erbil, IraqThis study was conducted to identify genetic genotype patterns for the species Lophochloa berythea (Boiss. et Blanche) Bor, L. obtusiflora (Boiss.) Gontsch., L. phleoides (Vill.) Rchb., L. pumila (Desf.) Bor, Schismus arabicus Nees. and S. barbatus (L.) Thell. from family Poaceae in Iraq by using polymerase chain reaction (PCR) and sequencing of chloroplast gene trnL-F technique. The result of the analysis of sequences and drawing the phylogenetic tree showed cluster analysis of the species and descendant species of the genus Schismus in a single clade alone in the base of phylogenetic tree and associated as a sister clade to the Lophochloa clade. The Lophochloa clade also subdivided in to two secondary clades. The first one gathered the L. phleoides and L. obtusiflora while the second gathered L. pumila and L. berythea with high support (bootstrapping) for all clades in cladogram. It seems that the sequences technique of chloroplast trnL-F gene has highly efficient in determination, separation and comparison between the two genera under study and support their descendant from one common ancestral origin.https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3303MolecularLophochloaSchismusPoaceaeIraq.
collection DOAJ
language English
format Article
sources DOAJ
author Aboothar Ha. Al-Edhari
Shaymaʼa Ma. Al Regawi
Abdullah Sh. Sardar
spellingShingle Aboothar Ha. Al-Edhari
Shaymaʼa Ma. Al Regawi
Abdullah Sh. Sardar
Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
Zanco Journal of Pure and Applied Sciences
Molecular
Lophochloa
Schismus
Poaceae
Iraq.
author_facet Aboothar Ha. Al-Edhari
Shaymaʼa Ma. Al Regawi
Abdullah Sh. Sardar
author_sort Aboothar Ha. Al-Edhari
title Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
title_short Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
title_full Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
title_fullStr Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
title_full_unstemmed Molecular Systematic Study for the Two Genera Lophochloa Rchb. & Schismus P. Beauv. (Poaceae) in Iraq
title_sort molecular systematic study for the two genera lophochloa rchb. & schismus p. beauv. (poaceae) in iraq
publisher Salahaddin University-Erbil
series Zanco Journal of Pure and Applied Sciences
issn 2412-3986
2218-0230
publishDate 2019-10-01
description This study was conducted to identify genetic genotype patterns for the species Lophochloa berythea (Boiss. et Blanche) Bor, L. obtusiflora (Boiss.) Gontsch., L. phleoides (Vill.) Rchb., L. pumila (Desf.) Bor, Schismus arabicus Nees. and S. barbatus (L.) Thell. from family Poaceae in Iraq by using polymerase chain reaction (PCR) and sequencing of chloroplast gene trnL-F technique. The result of the analysis of sequences and drawing the phylogenetic tree showed cluster analysis of the species and descendant species of the genus Schismus in a single clade alone in the base of phylogenetic tree and associated as a sister clade to the Lophochloa clade. The Lophochloa clade also subdivided in to two secondary clades. The first one gathered the L. phleoides and L. obtusiflora while the second gathered L. pumila and L. berythea with high support (bootstrapping) for all clades in cladogram. It seems that the sequences technique of chloroplast trnL-F gene has highly efficient in determination, separation and comparison between the two genera under study and support their descendant from one common ancestral origin.
topic Molecular
Lophochloa
Schismus
Poaceae
Iraq.
url https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3303
work_keys_str_mv AT abootharhaaledhari molecularsystematicstudyforthetwogeneralophochloarchbschismuspbeauvpoaceaeiniraq
AT shaymaʼamaalregawi molecularsystematicstudyforthetwogeneralophochloarchbschismuspbeauvpoaceaeiniraq
AT abdullahshsardar molecularsystematicstudyforthetwogeneralophochloarchbschismuspbeauvpoaceaeiniraq
_version_ 1725050936527683584