Gene Regulatory Network of the Maurer's Cleft Pathway in

The Maurer's clefts (MCs) are very important for the survival of Plasmodium falciparum within an infected cell as they are induced by the parasite itself in the erythrocyte for protein trafficking. The MCs form an interesting part of the parasite's biology as they shed more light on how th...

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Main Authors: Itunuoluwa Isewon, Jelili Oyelade, Benedikt Brors, Ezekiel Adebiyi
Format: Article
Language:English
Published: SAGE Publishing 2015-01-01
Series:Evolutionary Bioinformatics
Online Access:https://doi.org/10.4137/EBO.S25585
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spelling doaj-b03d700b635b495b99ddd7436ab907df2020-11-25T02:48:07ZengSAGE PublishingEvolutionary Bioinformatics1176-93432015-01-011110.4137/EBO.S25585 Gene Regulatory Network of the Maurer's Cleft Pathway in Itunuoluwa Isewon0Jelili Oyelade1Benedikt Brors2Ezekiel Adebiyi3Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota, Ogun State, Nigeria.Covenant University Bioinformatics Research (CUBRe), Covenant University, Ota, Ogun State, Nigeria.Department of Applied Bioinformatics, German Cancer Research Centre (DKFZ), Heidelberg, Germany.Department of Applied Bioinformatics, German Cancer Research Centre (DKFZ), Heidelberg, Germany.The Maurer's clefts (MCs) are very important for the survival of Plasmodium falciparum within an infected cell as they are induced by the parasite itself in the erythrocyte for protein trafficking. The MCs form an interesting part of the parasite's biology as they shed more light on how the parasite remodels the erythrocyte leading to host pathogenesis and death. Here, we predicted and analyzed the genetic regulatory network of genes identified to belong to the MCs using regularized graphical Gaussian model. Our network shows four major activators, their corresponding target genes, and predicted binding sites. One of these master activators is the serine repeat antigen 5 (SERA5), predominantly expressed among the SERA multigene family of P. falciparum , which is one of the blood-stage malaria vaccine candidates. Our results provide more details about functional interactions and the regulation of the genes in the MCs’ pathway of P. falciparum.https://doi.org/10.4137/EBO.S25585
collection DOAJ
language English
format Article
sources DOAJ
author Itunuoluwa Isewon
Jelili Oyelade
Benedikt Brors
Ezekiel Adebiyi
spellingShingle Itunuoluwa Isewon
Jelili Oyelade
Benedikt Brors
Ezekiel Adebiyi
Gene Regulatory Network of the Maurer's Cleft Pathway in
Evolutionary Bioinformatics
author_facet Itunuoluwa Isewon
Jelili Oyelade
Benedikt Brors
Ezekiel Adebiyi
author_sort Itunuoluwa Isewon
title Gene Regulatory Network of the Maurer's Cleft Pathway in
title_short Gene Regulatory Network of the Maurer's Cleft Pathway in
title_full Gene Regulatory Network of the Maurer's Cleft Pathway in
title_fullStr Gene Regulatory Network of the Maurer's Cleft Pathway in
title_full_unstemmed Gene Regulatory Network of the Maurer's Cleft Pathway in
title_sort gene regulatory network of the maurer's cleft pathway in
publisher SAGE Publishing
series Evolutionary Bioinformatics
issn 1176-9343
publishDate 2015-01-01
description The Maurer's clefts (MCs) are very important for the survival of Plasmodium falciparum within an infected cell as they are induced by the parasite itself in the erythrocyte for protein trafficking. The MCs form an interesting part of the parasite's biology as they shed more light on how the parasite remodels the erythrocyte leading to host pathogenesis and death. Here, we predicted and analyzed the genetic regulatory network of genes identified to belong to the MCs using regularized graphical Gaussian model. Our network shows four major activators, their corresponding target genes, and predicted binding sites. One of these master activators is the serine repeat antigen 5 (SERA5), predominantly expressed among the SERA multigene family of P. falciparum , which is one of the blood-stage malaria vaccine candidates. Our results provide more details about functional interactions and the regulation of the genes in the MCs’ pathway of P. falciparum.
url https://doi.org/10.4137/EBO.S25585
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