Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep

Lipin 1 plays an important role in lipid metabolism. In this study; we searched for variation in the ovine lipin 1 gene (<i>LPIN1</i>) in three gene regions (a 5&#8242; non-coding region; a region containing an alternatively spliced exon in intron 4; and a region containing coding ex...

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Main Authors: Guan Wang, Huitong Zhou, Hua Gong, Jianning He, Yuzhu Luo, Jon G. H. Hickford, Jiang Hu, Jiqing Wang, Xiu Liu, Shaobin Li
Format: Article
Language:English
Published: MDPI AG 2020-02-01
Series:Animals
Subjects:
Online Access:https://www.mdpi.com/2076-2615/10/2/237
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spelling doaj-afdd1cf094504af9bb58d0bafa56728c2020-11-25T02:20:25ZengMDPI AGAnimals2076-26152020-02-0110223710.3390/ani10020237ani10020237Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney SheepGuan Wang0Huitong Zhou1Hua Gong2Jianning He3Yuzhu Luo4Jon G. H. Hickford5Jiang Hu6Jiqing Wang7Xiu Liu8Shaobin Li9Gansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaInternational Wool Research Institute, Gansu Agricultural University, Lanzhou 730070, ChinaCollege of Animal Science and Technology, Qingdao Agricultural University, Qingdao 266109, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaInternational Wool Research Institute, Gansu Agricultural University, Lanzhou 730070, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaGansu Key Laboratory of Herbivorous Animal Biotechnology, Faculty of Animal Science and Technology, Gansu Agricultural University, Lanzhou 730070, ChinaLipin 1 plays an important role in lipid metabolism. In this study; we searched for variation in the ovine lipin 1 gene (<i>LPIN1</i>) in three gene regions (a 5&#8242; non-coding region; a region containing an alternatively spliced exon in intron 4; and a region containing coding exon 6) using polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) analysis. The greatest amount of alleles was found in coding exon 6; with five sequences being detected. The effect of variation in this exon was investigated in 242 New Zealand Romney lambs derived from 12 sire-lines. The presence of variant <i>E</i><sub>3</sub> was associated with a decrease in birth weight (<i>p</i> = 0.005) and the proportion of leg yield (<i>p</i> = 0.045), but with an increase in hot carcass weight (<i>p</i> = 0.032) and the proportion of loin yield (<i>p</i> = 0.014). The presence of variant <i>B</i><sub>3</sub> was associated with an increased pre-weaning growth rate (<i>p</i> = 0.041), whereas the presence of variant <i>C</i><sub>3</sub> was associated with an increase in shoulder yield (<i>p</i> &lt; 0.001). These results suggest that ovine <i>LPIN1</i> variation may have value as a genetic marker for improving meat production and carcass traits.https://www.mdpi.com/2076-2615/10/2/237lipin 1 gene (<i>lpin1</i>)nucleotide variationpcr-sscpbirth weightmeat yield
collection DOAJ
language English
format Article
sources DOAJ
author Guan Wang
Huitong Zhou
Hua Gong
Jianning He
Yuzhu Luo
Jon G. H. Hickford
Jiang Hu
Jiqing Wang
Xiu Liu
Shaobin Li
spellingShingle Guan Wang
Huitong Zhou
Hua Gong
Jianning He
Yuzhu Luo
Jon G. H. Hickford
Jiang Hu
Jiqing Wang
Xiu Liu
Shaobin Li
Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
Animals
lipin 1 gene (<i>lpin1</i>)
nucleotide variation
pcr-sscp
birth weight
meat yield
author_facet Guan Wang
Huitong Zhou
Hua Gong
Jianning He
Yuzhu Luo
Jon G. H. Hickford
Jiang Hu
Jiqing Wang
Xiu Liu
Shaobin Li
author_sort Guan Wang
title Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
title_short Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
title_full Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
title_fullStr Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
title_full_unstemmed Variation in the Lipin 1 Gene Is Associated with Birth Weight and Selected Carcass Traits in New Zealand Romney Sheep
title_sort variation in the lipin 1 gene is associated with birth weight and selected carcass traits in new zealand romney sheep
publisher MDPI AG
series Animals
issn 2076-2615
publishDate 2020-02-01
description Lipin 1 plays an important role in lipid metabolism. In this study; we searched for variation in the ovine lipin 1 gene (<i>LPIN1</i>) in three gene regions (a 5&#8242; non-coding region; a region containing an alternatively spliced exon in intron 4; and a region containing coding exon 6) using polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) analysis. The greatest amount of alleles was found in coding exon 6; with five sequences being detected. The effect of variation in this exon was investigated in 242 New Zealand Romney lambs derived from 12 sire-lines. The presence of variant <i>E</i><sub>3</sub> was associated with a decrease in birth weight (<i>p</i> = 0.005) and the proportion of leg yield (<i>p</i> = 0.045), but with an increase in hot carcass weight (<i>p</i> = 0.032) and the proportion of loin yield (<i>p</i> = 0.014). The presence of variant <i>B</i><sub>3</sub> was associated with an increased pre-weaning growth rate (<i>p</i> = 0.041), whereas the presence of variant <i>C</i><sub>3</sub> was associated with an increase in shoulder yield (<i>p</i> &lt; 0.001). These results suggest that ovine <i>LPIN1</i> variation may have value as a genetic marker for improving meat production and carcass traits.
topic lipin 1 gene (<i>lpin1</i>)
nucleotide variation
pcr-sscp
birth weight
meat yield
url https://www.mdpi.com/2076-2615/10/2/237
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