<it>Bios2mds</it>: an R package for comparing orthologous protein families by metric multidimensional scaling

<it>Bios2mds</it>: an R package for comparing orthologous protein families by metric multidimensional scaling

<p>Abstract</p> <p>Background</p> <p>The distance matrix computed from multiple alignments of homologous sequences is widely used by distance-based phylogenetic methods to provide information on the evolution of protein families. This matrix can also be visualized in a...

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Bibliographic Details
Main Authors: Pelé Julien, Bécu Jean-Michel, Abdi Hervé, Chabbert Marie
Format: Article
Language:English
Published: BMC 2012-06-01
Series:BMC Bioinformatics
Subjects:
Metric multidimensional scaling (MDS)
Principal coordinate analysis
R program
Supplementary elements
Evolution
Protein family
Phylogeny
Online Access:http://www.biomedcentral.com/1471-2105/13/133

Internet

http://www.biomedcentral.com/1471-2105/13/133

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