Developing JSequitur to Study the Hierarchical Structure of Biological Sequences in a Grammatical Inference Framework of String Compression Algorithms

Grammatical inference methods are expected to find grammatical structures hidden in biological sequences. One hopes that studies of grammar serve as an appropriate tool for theory formation. Thus, we have developed JSequitur for automatically generating the grammatical structure of biological sequen...

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Bibliographic Details
Main Authors: Bulgan Galbadrakh, Kyung-Eun Lee, Hyun-Seok Park
Format: Article
Language:English
Published: Korea Genome Organization 2012-12-01
Series:Genomics & Informatics
Subjects:
Online Access:http://genominfo.org/upload/pdf/gni-10-266.pdf