A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems

Manipulating a huge amount of data sets makes the mechanism of searching very difficult to find the best features combinations in phylogenetic tree construction. This article has proposed a binary particle swarm optimization algorithm that randomly selects chloroplast genes to construct phylogenetic...

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Bibliographic Details
Main Author:	Reem Alsrraj
Format:	Article
Language:	Arabic
Published:	University of Information Technology and Communications 2016-12-01
Series:	Iraqi Journal for Computers and Informatics
Subjects:	phylogenetic tree, mutation, combinations.
Online Access:	http://ijci.uoitc.edu.iq/index.php/ijci/article/view/86

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record_format	Article
spelling	doaj-ae794279e6324adba8ca48e71b34dc152020-11-25T03:46:59ZaraUniversity of Information Technology and CommunicationsIraqi Journal for Computers and Informatics2313-190X2520-49122016-12-01421646710.25195/ijci.v42i1.8686A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies ProblemsReem Alsrraj0 University of Information Technology and Communications (UOITC)Manipulating a huge amount of data sets makes the mechanism of searching very difficult to find the best features combinations in phylogenetic tree construction. This article has proposed a binary particle swarm optimization algorithm that randomly selects chloroplast genes to construct phylogenetic trees. Also, a simple mutation operator the article has suggested to speed up the search and facilitate the search process to find the best chloroplast genes combinations. These combinations can be evaluated according to the bootstrap values of all the nodes of the constructed tree.http://ijci.uoitc.edu.iq/index.php/ijci/article/view/86phylogenetic tree, mutation, combinations.
collection	DOAJ
language	Arabic
format	Article
sources	DOAJ
author	Reem Alsrraj
spellingShingle	Reem Alsrraj A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems Iraqi Journal for Computers and Informatics phylogenetic tree, mutation, combinations.
author_facet	Reem Alsrraj
author_sort	Reem Alsrraj
title	A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems
title_short	A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems
title_full	A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems
title_fullStr	A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems
title_full_unstemmed	A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems
title_sort	binary particle swarm algorithm with a simple mutation operator for solving phylogenies problems
publisher	University of Information Technology and Communications
series	Iraqi Journal for Computers and Informatics
issn	2313-190X 2520-4912
publishDate	2016-12-01
description	Manipulating a huge amount of data sets makes the mechanism of searching very difficult to find the best features combinations in phylogenetic tree construction. This article has proposed a binary particle swarm optimization algorithm that randomly selects chloroplast genes to construct phylogenetic trees. Also, a simple mutation operator the article has suggested to speed up the search and facilitate the search process to find the best chloroplast genes combinations. These combinations can be evaluated according to the bootstrap values of all the nodes of the constructed tree.
topic	phylogenetic tree, mutation, combinations.
url	http://ijci.uoitc.edu.iq/index.php/ijci/article/view/86
work_keys_str_mv	AT reemalsrraj abinaryparticleswarmalgorithmwithasimplemutationoperatorforsolvingphylogeniesproblems AT reemalsrraj binaryparticleswarmalgorithmwithasimplemutationoperatorforsolvingphylogeniesproblems
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A Binary Particle Swarm Algorithm with A Simple Mutation Operator for Solving Phylogenies Problems

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