Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.

The internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest...

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Main Authors: Liu Qian, Li Daren, Niu Qingliang, Huang Danfeng, Chang Liying
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0221259
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spelling doaj-acfdbb73b222427892d24798693f4a952021-03-03T21:22:00ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-01148e022125910.1371/journal.pone.0221259Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.Liu QianLi DarenNiu QingliangHuang DanfengChang LiyingThe internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest to us were measured. Pearson analysis showed that most external phenotypic traits were highly correlated with these internal phenotypes in muskmelon fruit. In this study, we used the random forest algorithm to predict muskmelon fruit internal phenotypes based on the significantly associated external parameters. Carotenoids, sucrose, and total soluble solid (TSS) were the three most accurately monitored internal phenotypes with prediction R-squared (R2) values of 0.947 (root-mean-square error (RMSE) = 0.019 mg/100 g), 0.918 (RMSE = 3.233 mg/g), and 0.916 (RMSE = 1.089%), respectively. Further, a simplified model was constructed and validated based on the top 10 external phenotypic parameters associated with each internal phenotype, and these parameters were filtered with the varImp function from the random forest package. The top 10 external phenotypic parameters correlated with each internal phenotype used in the simplified model were not identical. The results showed that the simplified models also accurately monitored the melon internal phenotypes, despite that the predicted R2 values decreased 0.3% to 7.9% compared with the original models. This study improved the efficiency and accuracy of real-time fruit quality monitoring for greenhouse muskmelon.https://doi.org/10.1371/journal.pone.0221259
collection DOAJ
language English
format Article
sources DOAJ
author Liu Qian
Li Daren
Niu Qingliang
Huang Danfeng
Chang Liying
spellingShingle Liu Qian
Li Daren
Niu Qingliang
Huang Danfeng
Chang Liying
Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
PLoS ONE
author_facet Liu Qian
Li Daren
Niu Qingliang
Huang Danfeng
Chang Liying
author_sort Liu Qian
title Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
title_short Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
title_full Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
title_fullStr Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
title_full_unstemmed Non-destructive monitoring of netted muskmelon quality based on its external phenotype using Random Forest.
title_sort non-destructive monitoring of netted muskmelon quality based on its external phenotype using random forest.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description The internal phenotypes of netted muskmelon (Cucumis melo L. var. eticulates Naud.) are always associated with its external phenotypes. In this study, the parameters of external phenotypic traits were extracted from muskmelon images captured by machine vision, and the internal phenotypes of interest to us were measured. Pearson analysis showed that most external phenotypic traits were highly correlated with these internal phenotypes in muskmelon fruit. In this study, we used the random forest algorithm to predict muskmelon fruit internal phenotypes based on the significantly associated external parameters. Carotenoids, sucrose, and total soluble solid (TSS) were the three most accurately monitored internal phenotypes with prediction R-squared (R2) values of 0.947 (root-mean-square error (RMSE) = 0.019 mg/100 g), 0.918 (RMSE = 3.233 mg/g), and 0.916 (RMSE = 1.089%), respectively. Further, a simplified model was constructed and validated based on the top 10 external phenotypic parameters associated with each internal phenotype, and these parameters were filtered with the varImp function from the random forest package. The top 10 external phenotypic parameters correlated with each internal phenotype used in the simplified model were not identical. The results showed that the simplified models also accurately monitored the melon internal phenotypes, despite that the predicted R2 values decreased 0.3% to 7.9% compared with the original models. This study improved the efficiency and accuracy of real-time fruit quality monitoring for greenhouse muskmelon.
url https://doi.org/10.1371/journal.pone.0221259
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AT niuqingliang nondestructivemonitoringofnettedmuskmelonqualitybasedonitsexternalphenotypeusingrandomforest
AT huangdanfeng nondestructivemonitoringofnettedmuskmelonqualitybasedonitsexternalphenotypeusingrandomforest
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