The importance of recognizing and reporting sequence database contamination for proteomics

The importance of recognizing and reporting sequence database contamination for proteomics

Advances in genome sequencing have made proteomic experiments more successful than ever. However, not all entries in a sequence database are of equal quality. Genome sequences are contaminated more frequently than is admitted. Contamination impacts homology-based proteomic, proteogenomic, and metapr...

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Bibliographic Details
Main Authors: Olivier Pible, Erica M. Hartmann, Gilles Imbert, Jean Armengaud
Format: Article
Language:English
Published: Elsevier 2014-06-01
Series:EuPA Open Proteomics
Subjects:
Database
Proteomics
Metaproteomics
Contamination
Blast analysis
Curation
Online Access:http://www.sciencedirect.com/science/article/pii/S2212968514000269

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