Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
<p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological trait...
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‘Marin Drăcea’ National Research-Development Institute in Forestry
2014-12-01
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doaj-ac5cae293ac647d7a0418218df4f31dc2020-11-25T01:23:21Zeng‘Marin Drăcea’ National Research-Development Institute in ForestryAnnals of Forest Research1844-81352065-24452014-12-0157217518010.15287/afr.2014.219206Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumilaG. Vasilyeva0V. Semerikov1Institute of Monitoring of Climatic and Ecological Systems, Siberian Branch of the Russian Academy of Sciences, 10/3, Academichesky Ave., 634055 Tomsk, RussiaInstitute of Plant and Animal Ecology, Ural Branch of the Russian Academy of Sciences, 202, 8 Marta Str., 620144 Ekaterinburg, Russia<p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological traits in the field. Three AFLP primer combinations detected 167 bands in 35 putative hybrids, and in 25 P. sibirica and 26 P. pumila individuals. Genetic variation in the hybrids was the highest, and was the lowest in P. sibirica. Principal coordinate analysis clustered P. sibirica, P. pumila and the hybrid genotypes into three distinct groups. Nei’s distance between the species was 0.193, whereas that between the hybrids and P. sibirica was 0.047, and between hybrids and P. pumila it was 0.074. Application of AFLP in the future studies promises to increase our knowledge of P. sibirica and P. pumila hybridization.</p>https://www.afrjournal.org/index.php/afr/article/view/219interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
G. Vasilyeva V. Semerikov |
spellingShingle |
G. Vasilyeva V. Semerikov Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila Annals of Forest Research interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation |
author_facet |
G. Vasilyeva V. Semerikov |
author_sort |
G. Vasilyeva |
title |
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila |
title_short |
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila |
title_full |
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila |
title_fullStr |
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila |
title_full_unstemmed |
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila |
title_sort |
application of amplified fragment length polymorphisms markers to study the hybridization between pinus sibirica and p. pumila |
publisher |
‘Marin Drăcea’ National Research-Development Institute in Forestry |
series |
Annals of Forest Research |
issn |
1844-8135 2065-2445 |
publishDate |
2014-12-01 |
description |
<p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological traits in the field. Three AFLP primer combinations detected 167 bands in 35 putative hybrids, and in 25 P. sibirica and 26 P. pumila individuals. Genetic variation in the hybrids was the highest, and was the lowest in P. sibirica. Principal coordinate analysis clustered P. sibirica, P. pumila and the hybrid genotypes into three distinct groups. Nei’s distance between the species was 0.193, whereas that between the hybrids and P. sibirica was 0.047, and between hybrids and P. pumila it was 0.074. Application of AFLP in the future studies promises to increase our knowledge of P. sibirica and P. pumila hybridization.</p> |
topic |
interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation |
url |
https://www.afrjournal.org/index.php/afr/article/view/219 |
work_keys_str_mv |
AT gvasilyeva applicationofamplifiedfragmentlengthpolymorphismsmarkerstostudythehybridizationbetweenpinussibiricaandppumila AT vsemerikov applicationofamplifiedfragmentlengthpolymorphismsmarkerstostudythehybridizationbetweenpinussibiricaandppumila |
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