Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila

<p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological trait...

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Main Authors: G. Vasilyeva, V. Semerikov
Format: Article
Language:English
Published: ‘Marin Drăcea’ National Research-Development Institute in Forestry 2014-12-01
Series:Annals of Forest Research
Subjects:
Online Access:https://www.afrjournal.org/index.php/afr/article/view/219
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spelling doaj-ac5cae293ac647d7a0418218df4f31dc2020-11-25T01:23:21Zeng‘Marin Drăcea’ National Research-Development Institute in ForestryAnnals of Forest Research1844-81352065-24452014-12-0157217518010.15287/afr.2014.219206Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumilaG. Vasilyeva0V. Semerikov1Institute of Monitoring of Climatic and Ecological Systems, Siberian Branch of the Russian Academy of Sciences, 10/3, Academichesky Ave., 634055 Tomsk, RussiaInstitute of Plant and Animal Ecology, Ural Branch of the Russian Academy of Sciences, 202, 8 Marta Str., 620144 Ekaterinburg, Russia<p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological traits in the field. Three AFLP primer combinations detected 167 bands in 35 putative hybrids, and in 25 P. sibirica and 26 P. pumila individuals. Genetic variation in the hybrids was the highest, and was the lowest in P. sibirica. Principal coordinate analysis clustered P. sibirica, P. pumila and the hybrid genotypes into three distinct groups. Nei’s distance between the species was 0.193, whereas that between the hybrids and P. sibirica was 0.047, and between hybrids and P. pumila it was 0.074. Application of AFLP in the future studies promises to increase our knowledge of P. sibirica and P. pumila hybridization.</p>https://www.afrjournal.org/index.php/afr/article/view/219interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation
collection DOAJ
language English
format Article
sources DOAJ
author G. Vasilyeva
V. Semerikov
spellingShingle G. Vasilyeva
V. Semerikov
Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
Annals of Forest Research
interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation
author_facet G. Vasilyeva
V. Semerikov
author_sort G. Vasilyeva
title Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
title_short Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
title_full Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
title_fullStr Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
title_full_unstemmed Application of amplified fragment length polymorphisms markers to study the hybridization between Pinus sibirica and P. pumila
title_sort application of amplified fragment length polymorphisms markers to study the hybridization between pinus sibirica and p. pumila
publisher ‘Marin Drăcea’ National Research-Development Institute in Forestry
series Annals of Forest Research
issn 1844-8135
2065-2445
publishDate 2014-12-01
description <p>The genetic diversity of Pinus sibirica, P. pumila, and their hybrids, in a mixed natural stand was studied using amplified fragment length polymorphisms (AFLP). The stand was situated in the northern slope of the Khamar-Daban Ridge. Hybrid trees were determined by their morphological traits in the field. Three AFLP primer combinations detected 167 bands in 35 putative hybrids, and in 25 P. sibirica and 26 P. pumila individuals. Genetic variation in the hybrids was the highest, and was the lowest in P. sibirica. Principal coordinate analysis clustered P. sibirica, P. pumila and the hybrid genotypes into three distinct groups. Nei’s distance between the species was 0.193, whereas that between the hybrids and P. sibirica was 0.047, and between hybrids and P. pumila it was 0.074. Application of AFLP in the future studies promises to increase our knowledge of P. sibirica and P. pumila hybridization.</p>
topic interspecies hybridization, five-needle pines, pinus sibirica, pinus pumila, amplified fragment length polymorphisms, aflp, genetic variation
url https://www.afrjournal.org/index.php/afr/article/view/219
work_keys_str_mv AT gvasilyeva applicationofamplifiedfragmentlengthpolymorphismsmarkerstostudythehybridizationbetweenpinussibiricaandppumila
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