Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.

A central goal of cognitive neuroscience is to decode human brain activity-that is, to infer mental processes from observed patterns of whole-brain activation. Previous decoding efforts have focused on classifying brain activity into a small set of discrete cognitive states. To attain maximal utilit...

Full description

Bibliographic Details
Main Authors: Timothy N Rubin, Oluwasanmi Koyejo, Krzysztof J Gorgolewski, Michael N Jones, Russell A Poldrack, Tal Yarkoni
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2017-10-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1005649
id doaj-ac4fc189672844c7a1a2d4fe4e4d55fd
record_format Article
spelling doaj-ac4fc189672844c7a1a2d4fe4e4d55fd2021-06-17T04:33:31ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582017-10-011310e100564910.1371/journal.pcbi.1005649Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.Timothy N RubinOluwasanmi KoyejoKrzysztof J GorgolewskiMichael N JonesRussell A PoldrackTal YarkoniA central goal of cognitive neuroscience is to decode human brain activity-that is, to infer mental processes from observed patterns of whole-brain activation. Previous decoding efforts have focused on classifying brain activity into a small set of discrete cognitive states. To attain maximal utility, a decoding framework must be open-ended, systematic, and context-sensitive-that is, capable of interpreting numerous brain states, presented in arbitrary combinations, in light of prior information. Here we take steps towards this objective by introducing a probabilistic decoding framework based on a novel topic model-Generalized Correspondence Latent Dirichlet Allocation-that learns latent topics from a database of over 11,000 published fMRI studies. The model produces highly interpretable, spatially-circumscribed topics that enable flexible decoding of whole-brain images. Importantly, the Bayesian nature of the model allows one to "seed" decoder priors with arbitrary images and text-enabling researchers, for the first time, to generate quantitative, context-sensitive interpretations of whole-brain patterns of brain activity.https://doi.org/10.1371/journal.pcbi.1005649
collection DOAJ
language English
format Article
sources DOAJ
author Timothy N Rubin
Oluwasanmi Koyejo
Krzysztof J Gorgolewski
Michael N Jones
Russell A Poldrack
Tal Yarkoni
spellingShingle Timothy N Rubin
Oluwasanmi Koyejo
Krzysztof J Gorgolewski
Michael N Jones
Russell A Poldrack
Tal Yarkoni
Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
PLoS Computational Biology
author_facet Timothy N Rubin
Oluwasanmi Koyejo
Krzysztof J Gorgolewski
Michael N Jones
Russell A Poldrack
Tal Yarkoni
author_sort Timothy N Rubin
title Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
title_short Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
title_full Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
title_fullStr Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
title_full_unstemmed Decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
title_sort decoding brain activity using a large-scale probabilistic functional-anatomical atlas of human cognition.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2017-10-01
description A central goal of cognitive neuroscience is to decode human brain activity-that is, to infer mental processes from observed patterns of whole-brain activation. Previous decoding efforts have focused on classifying brain activity into a small set of discrete cognitive states. To attain maximal utility, a decoding framework must be open-ended, systematic, and context-sensitive-that is, capable of interpreting numerous brain states, presented in arbitrary combinations, in light of prior information. Here we take steps towards this objective by introducing a probabilistic decoding framework based on a novel topic model-Generalized Correspondence Latent Dirichlet Allocation-that learns latent topics from a database of over 11,000 published fMRI studies. The model produces highly interpretable, spatially-circumscribed topics that enable flexible decoding of whole-brain images. Importantly, the Bayesian nature of the model allows one to "seed" decoder priors with arbitrary images and text-enabling researchers, for the first time, to generate quantitative, context-sensitive interpretations of whole-brain patterns of brain activity.
url https://doi.org/10.1371/journal.pcbi.1005649
work_keys_str_mv AT timothynrubin decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
AT oluwasanmikoyejo decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
AT krzysztofjgorgolewski decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
AT michaelnjones decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
AT russellapoldrack decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
AT talyarkoni decodingbrainactivityusingalargescaleprobabilisticfunctionalanatomicalatlasofhumancognition
_version_ 1721374661720145920