Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.

Pyrus ussriensis Maxim. is native to the northern part of China, but whose habitats are currently being destroyed by environmental changes and human deforestation. An investigation of population structure and genetic diversity of wild Ussurian pear is a priority in order to acquire fundamental knowl...

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Main Authors: Tana Wuyun, Hitomi Amo, Jingshi Xu, Teng Ma, Chiyomi Uematsu, Hironori Katayama
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4529180?pdf=render
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spelling doaj-ab59b50e27e5481c9ebf0556ef0504c72020-11-25T01:21:40ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01108e013368610.1371/journal.pone.0133686Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.Tana WuyunHitomi AmoJingshi XuTeng MaChiyomi UematsuHironori KatayamaPyrus ussriensis Maxim. is native to the northern part of China, but whose habitats are currently being destroyed by environmental changes and human deforestation. An investigation of population structure and genetic diversity of wild Ussurian pear is a priority in order to acquire fundamental knowledge for conservation. A total of 153 individuals of wild Ussurian pear from the main habitats, Heilongjiang, Jilin, and Inner Mongolia in China, possessed low genetic diversity as a result of habitat fragmentation. The genetic diversity of the populations in Inner Mongolia and north east of Heilongjiang was especially low and there was the possibility of inbreeding. Wild Ussurian pears were divided into 5 groups based on the Bayesian clustering method using 20 nuclear SSRs (nSSRs) and 5 groups by haplotype distributions using 16 chloroplast SSRs (cpSSRs), and the populations in Inner Mongolia and north east of Heilongjiang represented unique genotypes. AMOVA indicated there was a 20.05% variation in nSSRs and a 44.40% variation in cpSSRs among populations. These values are relatively high when compared to those of other tree species. Haplotype E, positioned in the center of the cpSSR analysis network and showed the largest number of connections with other haplotypes, represented the most important haplotype. Inner Mongolia and the north east of Heilongjiang are two areas that need urgent conservation because of their genetic vulnerability and peculiarity. We determined 4 conservation units based on the clustering by nSSRs and cpSSRs, and geographic factor. This information is helpful in deciding the conservation strategies for wild Ussurian pear in China.http://europepmc.org/articles/PMC4529180?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Tana Wuyun
Hitomi Amo
Jingshi Xu
Teng Ma
Chiyomi Uematsu
Hironori Katayama
spellingShingle Tana Wuyun
Hitomi Amo
Jingshi Xu
Teng Ma
Chiyomi Uematsu
Hironori Katayama
Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
PLoS ONE
author_facet Tana Wuyun
Hitomi Amo
Jingshi Xu
Teng Ma
Chiyomi Uematsu
Hironori Katayama
author_sort Tana Wuyun
title Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
title_short Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
title_full Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
title_fullStr Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
title_full_unstemmed Population Structure of and Conservation Strategies for Wild Pyrus ussuriensis Maxim. in China.
title_sort population structure of and conservation strategies for wild pyrus ussuriensis maxim. in china.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2015-01-01
description Pyrus ussriensis Maxim. is native to the northern part of China, but whose habitats are currently being destroyed by environmental changes and human deforestation. An investigation of population structure and genetic diversity of wild Ussurian pear is a priority in order to acquire fundamental knowledge for conservation. A total of 153 individuals of wild Ussurian pear from the main habitats, Heilongjiang, Jilin, and Inner Mongolia in China, possessed low genetic diversity as a result of habitat fragmentation. The genetic diversity of the populations in Inner Mongolia and north east of Heilongjiang was especially low and there was the possibility of inbreeding. Wild Ussurian pears were divided into 5 groups based on the Bayesian clustering method using 20 nuclear SSRs (nSSRs) and 5 groups by haplotype distributions using 16 chloroplast SSRs (cpSSRs), and the populations in Inner Mongolia and north east of Heilongjiang represented unique genotypes. AMOVA indicated there was a 20.05% variation in nSSRs and a 44.40% variation in cpSSRs among populations. These values are relatively high when compared to those of other tree species. Haplotype E, positioned in the center of the cpSSR analysis network and showed the largest number of connections with other haplotypes, represented the most important haplotype. Inner Mongolia and the north east of Heilongjiang are two areas that need urgent conservation because of their genetic vulnerability and peculiarity. We determined 4 conservation units based on the clustering by nSSRs and cpSSRs, and geographic factor. This information is helpful in deciding the conservation strategies for wild Ussurian pear in China.
url http://europepmc.org/articles/PMC4529180?pdf=render
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