Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes

Abstract Background The role of tumor-infiltrating B-cells (TIBs) and intratumorally-produced antibodies in cancer-immunity interactions essentially remains terra incognita. In particular, it remains unexplored how driver mutations could be associated with distinct TIBs signatures and their role in...

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Main Authors: O. I. Isaeva, G. V. Sharonov, E. O. Serebrovskaya, M. A. Turchaninova, A. R. Zaretsky, M. Shugay, D. M. Chudakov
Format: Article
Language:English
Published: BMJ Publishing Group 2019-10-01
Series:Journal for ImmunoTherapy of Cancer
Online Access:http://link.springer.com/article/10.1186/s40425-019-0747-1
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spelling doaj-ab110f42c8214b0f9e359aed93ddf4c52020-11-25T00:41:01ZengBMJ Publishing GroupJournal for ImmunoTherapy of Cancer2051-14262019-10-017111110.1186/s40425-019-0747-1Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypesO. I. Isaeva0G. V. Sharonov1E. O. Serebrovskaya2M. A. Turchaninova3A. R. Zaretsky4M. Shugay5D. M. Chudakov6Center of Life Sciences, Skolkovo Institute of Science and TechnologyLaboratory of Genomics of Antitumor Adaptive Immunity, Privolzhsky Research Medical UniversityGenomics of Adaptive Immunity Department, Shemyakin and Ovchinnikov Institute of Bioorganic ChemistryLaboratory of Genomics of Antitumor Adaptive Immunity, Privolzhsky Research Medical UniversityGenomics of Adaptive Immunity Department, Shemyakin and Ovchinnikov Institute of Bioorganic ChemistryCenter of Life Sciences, Skolkovo Institute of Science and TechnologyCenter of Life Sciences, Skolkovo Institute of Science and TechnologyAbstract Background The role of tumor-infiltrating B-cells (TIBs) and intratumorally-produced antibodies in cancer-immunity interactions essentially remains terra incognita. In particular, it remains unexplored how driver mutations could be associated with distinct TIBs signatures and their role in tumor microenvironment. Methods Here we analyzed associations of immunoglobulin isotypes and clonality with survival in TCGA RNA-Seq data for lung adenocarcinoma (LUAD), stratifying patients into 12 driver mutation and phenotypic tumor subgroups. Results We revealed several unexpected associations between TIBs behavior and prognosis. Abundance and high proportion of IgG1 isotype, and low proportion of IgA among all intratumorally produced immunoglobulins were specifically associated with improved overall survival for KRAS mut but not KRAS wt LUAD, revealing the first link between a driver mutation and B-cell response. We found specific IgG1 signature associated with long survival, which suggests that particular specificities of IgG1+ TIBs could be beneficial in KRAS mut LUAD. In contrast to our previous observations for melanoma, highly clonal IgG1 production by plasma cells had no meaningful effect on prognosis, suggesting that IgG1+ TIBs may exert a beneficial effect in KRAS mut cases in an alternative way, such as efficient presentation of cognate antigens or direct B cell attack on tumor cells. Notably, a high proportion of the IgG1 isotype is positively correlated with the non-silent mutation burden both in the general LUAD cohort and in most patient subgroups, supporting a role for IgG1+ TIBs in antigen presentation. Complementing the recent finding that the presence of stromal IgG4-producing cells is associated with a favorable prognosis for patients with stage I squamous cell carcinoma, we show that the abundance of IgG4-producing TIBs likewise has a strong positive effect on overall survival in STK11 mut and proximal proliferative subgroups of LUAD patients. We hypothesize that the positive role of IgG4 antibodies in some of the lung cancer subtypes could be associated with reported inability of IgG4 isotype to form immune complexes, thus preventing immunosuppression via activation of the myeloid-derived suppressor cell (MDSC) phenotype. Conclusions We discover prominent and distinct associations between TIBs antibody isotypes and survival in lung adenocarcinoma carrying specific driver mutations. These findings indicate that particular types of tumor-immunity relations could be beneficial in particular driver mutation context, which should be taken into account in developing strategies of cancer immunotherapy and combination therapies. Specificity of protective B cell populations in specific cancer subgroups could become a clue to efficient targeted immunotherapies for appropriate cohorts of patients.http://link.springer.com/article/10.1186/s40425-019-0747-1
collection DOAJ
language English
format Article
sources DOAJ
author O. I. Isaeva
G. V. Sharonov
E. O. Serebrovskaya
M. A. Turchaninova
A. R. Zaretsky
M. Shugay
D. M. Chudakov
spellingShingle O. I. Isaeva
G. V. Sharonov
E. O. Serebrovskaya
M. A. Turchaninova
A. R. Zaretsky
M. Shugay
D. M. Chudakov
Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
Journal for ImmunoTherapy of Cancer
author_facet O. I. Isaeva
G. V. Sharonov
E. O. Serebrovskaya
M. A. Turchaninova
A. R. Zaretsky
M. Shugay
D. M. Chudakov
author_sort O. I. Isaeva
title Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
title_short Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
title_full Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
title_fullStr Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
title_full_unstemmed Intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
title_sort intratumoral immunoglobulin isotypes predict survival in lung adenocarcinoma subtypes
publisher BMJ Publishing Group
series Journal for ImmunoTherapy of Cancer
issn 2051-1426
publishDate 2019-10-01
description Abstract Background The role of tumor-infiltrating B-cells (TIBs) and intratumorally-produced antibodies in cancer-immunity interactions essentially remains terra incognita. In particular, it remains unexplored how driver mutations could be associated with distinct TIBs signatures and their role in tumor microenvironment. Methods Here we analyzed associations of immunoglobulin isotypes and clonality with survival in TCGA RNA-Seq data for lung adenocarcinoma (LUAD), stratifying patients into 12 driver mutation and phenotypic tumor subgroups. Results We revealed several unexpected associations between TIBs behavior and prognosis. Abundance and high proportion of IgG1 isotype, and low proportion of IgA among all intratumorally produced immunoglobulins were specifically associated with improved overall survival for KRAS mut but not KRAS wt LUAD, revealing the first link between a driver mutation and B-cell response. We found specific IgG1 signature associated with long survival, which suggests that particular specificities of IgG1+ TIBs could be beneficial in KRAS mut LUAD. In contrast to our previous observations for melanoma, highly clonal IgG1 production by plasma cells had no meaningful effect on prognosis, suggesting that IgG1+ TIBs may exert a beneficial effect in KRAS mut cases in an alternative way, such as efficient presentation of cognate antigens or direct B cell attack on tumor cells. Notably, a high proportion of the IgG1 isotype is positively correlated with the non-silent mutation burden both in the general LUAD cohort and in most patient subgroups, supporting a role for IgG1+ TIBs in antigen presentation. Complementing the recent finding that the presence of stromal IgG4-producing cells is associated with a favorable prognosis for patients with stage I squamous cell carcinoma, we show that the abundance of IgG4-producing TIBs likewise has a strong positive effect on overall survival in STK11 mut and proximal proliferative subgroups of LUAD patients. We hypothesize that the positive role of IgG4 antibodies in some of the lung cancer subtypes could be associated with reported inability of IgG4 isotype to form immune complexes, thus preventing immunosuppression via activation of the myeloid-derived suppressor cell (MDSC) phenotype. Conclusions We discover prominent and distinct associations between TIBs antibody isotypes and survival in lung adenocarcinoma carrying specific driver mutations. These findings indicate that particular types of tumor-immunity relations could be beneficial in particular driver mutation context, which should be taken into account in developing strategies of cancer immunotherapy and combination therapies. Specificity of protective B cell populations in specific cancer subgroups could become a clue to efficient targeted immunotherapies for appropriate cohorts of patients.
url http://link.springer.com/article/10.1186/s40425-019-0747-1
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