Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children
Background: The extent to which ambient benzo[a]pyrene (B[a]P) contributes to mechanistically distinct de novo asthma remains unknown. Objectives: To identify molecular signatures and regulatory networks underlying childhood exposure to ambient B[a]P and asthma, using robust and unbiased systems bio...
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doaj-a9e71879c3c54939ac5b98f9c42b6ee42020-11-25T01:30:39ZengElsevierEnvironment International0160-41202019-07-01128218232Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic childrenHyunok Choi0Won-min Song1Minghui Wang2Radim J. Sram3Bin Zhang4Departments of Environmental Health Sciences, Epidemiology, and Biostatistics, State University of New York at Albany School of Public Health, Rensselaer, NY, USA; Correspondence to: H. Choi, One University Place, Room 153, Rensselaer, NY 12144-3456, USA.Icahn Institute of Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USAIcahn Institute of Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USADepartment of Genetic Toxicology and Nanotoxicology, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, v.v.i., Vídeňská 1083, 142 20 Prague 4, Czech Republic; University of Chemistry and Technology, Prague, Faculty of Food and Biochemical Technology, Department of Food Analysis and Nutrition, Technicka 3, 166 28 Prague, Czech RepublicIcahn Institute of Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Correspondence to: B. Zhang, Leon and Norma Hess Center for Science and Medicine, Room S8-111, Box 1498, 1470 Madison Avenue, New York, NY 10029, USA.Background: The extent to which ambient benzo[a]pyrene (B[a]P) contributes to mechanistically distinct de novo asthma remains unknown. Objectives: To identify molecular signatures and regulatory networks underlying childhood exposure to ambient B[a]P and asthma, using robust and unbiased systems biology approaches. Methods: Clinically confirmed asthmatic (n = 191) vs. control (n = 194) children (aged, 7–15) were enrolled from a polluted urban center and semi-rural region in Czech Republic. Contemporaneous B[a]P concentration, gene expressions, DNA methylation data were analyzed against asthma diagnosis, as well as a modified prognostic index of asthma, using integrative multiscale co-expression network analysis. Sample-wise cell type compositions were inferred by a machine learning approach (i.e. CIBERSORT) with reference gene expressions of purified 38 distinct hematopoietic cell states from umbilical cord (i.e. stem cell/progenitors) or peripheral blood (i.e. lymphocytes). Results: The median outdoor B[a]P was increased near the homes of the urban children with ‘moderate’ or ‘severe’ prognostic markers of asthma, but not in the urban controls. An elevated B[a]P induced epigenetic suppression of NF-κB inflammation, decreased Natural Killer T (NKT) cells and activated anti-inflammatory IL10-secreting CD8+ T effective memory cells. B[a]P was positively correlated with an increased expression of a heme biosynthesis gene, ALAS2, which in turn, appears to promote concurrent increase of neutrophilic metamyelocyte and mature CD71low erythroid cells. Furthermore, erythroid-specific master transcription regulator gene (GATA1), glutathione transferase genes (GSTM1 and GSTM3) and Eosinophil marker (IL5RA) were simultaneously activated in the urban asthma cases. Conclusions: B[a]P might contribute to concurrent suppression of pro-inflammatory (e.g. NF-κB mediated NKT cells), and activation of anti-inflammatory pathways (e.g. IL10-secreting CD8+ T cells) in the urban asthmatic children. In addition, B[a]P appears to elevate heme biosynthesis, which in turn, promotes neutrophilic metamyelocyte expansion and reduction of CD71+ erythroids. Keywords: Polycyclic aromatic hydrocarbon, Asthma, Air pollution, Gene co-expression network analysis, Multiscale clustering analysis, Environmental systems biologyhttp://www.sciencedirect.com/science/article/pii/S0160412018317215 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Hyunok Choi Won-min Song Minghui Wang Radim J. Sram Bin Zhang |
spellingShingle |
Hyunok Choi Won-min Song Minghui Wang Radim J. Sram Bin Zhang Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children Environment International |
author_facet |
Hyunok Choi Won-min Song Minghui Wang Radim J. Sram Bin Zhang |
author_sort |
Hyunok Choi |
title |
Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
title_short |
Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
title_full |
Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
title_fullStr |
Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
title_full_unstemmed |
Benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
title_sort |
benzo[a]pyrene is associated with dysregulated myelo-lymphoid hematopoiesis in asthmatic children |
publisher |
Elsevier |
series |
Environment International |
issn |
0160-4120 |
publishDate |
2019-07-01 |
description |
Background: The extent to which ambient benzo[a]pyrene (B[a]P) contributes to mechanistically distinct de novo asthma remains unknown. Objectives: To identify molecular signatures and regulatory networks underlying childhood exposure to ambient B[a]P and asthma, using robust and unbiased systems biology approaches. Methods: Clinically confirmed asthmatic (n = 191) vs. control (n = 194) children (aged, 7–15) were enrolled from a polluted urban center and semi-rural region in Czech Republic. Contemporaneous B[a]P concentration, gene expressions, DNA methylation data were analyzed against asthma diagnosis, as well as a modified prognostic index of asthma, using integrative multiscale co-expression network analysis. Sample-wise cell type compositions were inferred by a machine learning approach (i.e. CIBERSORT) with reference gene expressions of purified 38 distinct hematopoietic cell states from umbilical cord (i.e. stem cell/progenitors) or peripheral blood (i.e. lymphocytes). Results: The median outdoor B[a]P was increased near the homes of the urban children with ‘moderate’ or ‘severe’ prognostic markers of asthma, but not in the urban controls. An elevated B[a]P induced epigenetic suppression of NF-κB inflammation, decreased Natural Killer T (NKT) cells and activated anti-inflammatory IL10-secreting CD8+ T effective memory cells. B[a]P was positively correlated with an increased expression of a heme biosynthesis gene, ALAS2, which in turn, appears to promote concurrent increase of neutrophilic metamyelocyte and mature CD71low erythroid cells. Furthermore, erythroid-specific master transcription regulator gene (GATA1), glutathione transferase genes (GSTM1 and GSTM3) and Eosinophil marker (IL5RA) were simultaneously activated in the urban asthma cases. Conclusions: B[a]P might contribute to concurrent suppression of pro-inflammatory (e.g. NF-κB mediated NKT cells), and activation of anti-inflammatory pathways (e.g. IL10-secreting CD8+ T cells) in the urban asthmatic children. In addition, B[a]P appears to elevate heme biosynthesis, which in turn, promotes neutrophilic metamyelocyte expansion and reduction of CD71+ erythroids. Keywords: Polycyclic aromatic hydrocarbon, Asthma, Air pollution, Gene co-expression network analysis, Multiscale clustering analysis, Environmental systems biology |
url |
http://www.sciencedirect.com/science/article/pii/S0160412018317215 |
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