A sensitive short read homology search tool for paired-end read sequencing data

Abstract Background Homology search is still a significant step in functional analysis for genomic data. Profile Hidden Markov Model-based homology search has been widely used in protein domain analysis in many different species. In particular, with the fast accumulation of transcriptomic data of no...

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Bibliographic Details
Main Authors: Prapaporn Techa-Angkoon, Yanni Sun, Jikai Lei
Format: Article
Language:English
Published: BMC 2017-10-01
Series:BMC Bioinformatics
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12859-017-1826-2