The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations

Estimation of total number of a population of cells that are sparsely distributed in an organ or anatomically-defined region of interest represents a challenge for conventional stereological methods. In these situations, classic fractionator approaches that rely on systematic uniform random sampling...

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Main Authors: Rogely W. Boyce, Hans J. G. Gundersen
Format: Article
Language:English
Published: Frontiers Media S.A. 2018-03-01
Series:Frontiers in Neuroanatomy
Subjects:
Online Access:http://journal.frontiersin.org/article/10.3389/fnana.2018.00019/full
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spelling doaj-a8d347b959ab45b689eae2ad8388119e2020-11-24T22:57:44ZengFrontiers Media S.A.Frontiers in Neuroanatomy1662-51292018-03-011210.3389/fnana.2018.00019304564The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell PopulationsRogely W. Boyce0Hans J. G. Gundersen1Amgen Inc., Comparative Biology and Safety Sciences, Thousand Oaks, CA, United StatesAarhus University, Aarhus, DenmarkEstimation of total number of a population of cells that are sparsely distributed in an organ or anatomically-defined region of interest represents a challenge for conventional stereological methods. In these situations, classic fractionator approaches that rely on systematic uniform random sampling are highly inefficient and, in many cases, impractical due to the intense sampling of the organ and tissue sections that is required to obtain sufficient counts for an acceptable level of precision. The proportionator, an estimator based on non-uniform sampling theory, marries automated image analysis with stereological principles and is the only estimator that provides a highly efficient and precise method to address these challenging quantification problems. In this paper, the practical considerations of the proportionator estimator and its implementation with Proportionator™ software and digital slide imaging are reviewed. The power of the proportionator as a stereological tool is illustrated in its application to the estimation of the total number of a very rare (~50/vertebrae) and sparsely distributed population of osteoprogenitor cells in mouse vertebral body. The proportionator offers a solution to neuroscientists interested in quantifying total cell number of sparse cell populations in the central and peripheral nervous system where systematic uniform random sampling-based stereological estimators are impractical.http://journal.frontiersin.org/article/10.3389/fnana.2018.00019/fullproportionatornonuniform samplingcell numberimage analysisfractionator
collection DOAJ
language English
format Article
sources DOAJ
author Rogely W. Boyce
Hans J. G. Gundersen
spellingShingle Rogely W. Boyce
Hans J. G. Gundersen
The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
Frontiers in Neuroanatomy
proportionator
nonuniform sampling
cell number
image analysis
fractionator
author_facet Rogely W. Boyce
Hans J. G. Gundersen
author_sort Rogely W. Boyce
title The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
title_short The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
title_full The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
title_fullStr The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
title_full_unstemmed The Automatic Proportionator Estimator Is Highly Efficient for Estimation of Total Number of Sparse Cell Populations
title_sort automatic proportionator estimator is highly efficient for estimation of total number of sparse cell populations
publisher Frontiers Media S.A.
series Frontiers in Neuroanatomy
issn 1662-5129
publishDate 2018-03-01
description Estimation of total number of a population of cells that are sparsely distributed in an organ or anatomically-defined region of interest represents a challenge for conventional stereological methods. In these situations, classic fractionator approaches that rely on systematic uniform random sampling are highly inefficient and, in many cases, impractical due to the intense sampling of the organ and tissue sections that is required to obtain sufficient counts for an acceptable level of precision. The proportionator, an estimator based on non-uniform sampling theory, marries automated image analysis with stereological principles and is the only estimator that provides a highly efficient and precise method to address these challenging quantification problems. In this paper, the practical considerations of the proportionator estimator and its implementation with Proportionator™ software and digital slide imaging are reviewed. The power of the proportionator as a stereological tool is illustrated in its application to the estimation of the total number of a very rare (~50/vertebrae) and sparsely distributed population of osteoprogenitor cells in mouse vertebral body. The proportionator offers a solution to neuroscientists interested in quantifying total cell number of sparse cell populations in the central and peripheral nervous system where systematic uniform random sampling-based stereological estimators are impractical.
topic proportionator
nonuniform sampling
cell number
image analysis
fractionator
url http://journal.frontiersin.org/article/10.3389/fnana.2018.00019/full
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