Testing the limits of 454 pyrotag sequencing: reproducibility, quantitative assessment and comparison to T-RFLP fingerprinting of aquifer microbes.
The characterization of microbial community structure via 16S rRNA gene profiling has been greatly advanced in recent years by the introduction of amplicon pyrosequencing. The possibility of barcoding gives the opportunity to massively screen multiple samples from environmental or clinical sources f...
Main Authors: | Giovanni Pilloni, Michael S Granitsiotis, Marion Engel, Tillmann Lueders |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2012-01-01
|
Series: | PLoS ONE |
Online Access: | http://europepmc.org/articles/PMC3395703?pdf=render |
Similar Items
-
Dynamics of Hydrology and Anaerobic Hydrocarbon Degrader Communities in A Tar-Oil Contaminated Aquifer
by: Giovanni Pilloni, et al.
Published: (2019-02-01) -
Eukaryotic richness in the abyss: insights from pyrotag sequencing.
by: Jan Pawlowski, et al.
Published: (2011-01-01) -
Biased diversity metrics revealed by bacterial 16S pyrotags derived from different primer sets.
by: Lin Cai, et al.
Published: (2013-01-01) -
Pyrotag sequencing of the gut microbiota of the cockroach Shelfordella lateralis reveals a highly dynamic core but only limited effects of diet on community structure.
by: Christine Schauer, et al.
Published: (2014-01-01) -
The influence of the cage system and colonisation of <it>Salmonella </it>Enteritidis on the microbial gut flora of laying hens studied by T-RFLP and 454 pyrosequencing
by: Van Immerseel Filip, et al.
Published: (2011-08-01)