Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus

Ostrich diseases characterized by paralysis have been breaking out in broad areas of China since 2015, causing major damage to the ostrich breeding industry in China. This report describes a parvovirus detected in ostriches from four different regions. The entire genomes of four parvovirus strains w...

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Main Authors: Kunpeng Yuan, Dongdong Wang, Qingdong Luan, Ju Sun, Qianwen Gao, Zhiyao Jiang, Shouchun Wang, Yijun Han, Xueting Qu, Yueying Cui, Shimei Qiu, Youxia Di, Xiaoyi Wang, Shige Song, Peiheng Wang, Shilong Xia, Yongle Yu, Weiquan Liu, Yanbo Yin
Format: Article
Language:English
Published: MDPI AG 2020-03-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/12/3/334
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spelling doaj-a6f25306a0f340009ba6723a0951de3e2020-11-25T02:52:24ZengMDPI AGViruses1999-49152020-03-0112333410.3390/v12030334v12030334Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich ParvovirusKunpeng Yuan0Dongdong Wang1Qingdong Luan2Ju Sun3Qianwen Gao4Zhiyao Jiang5Shouchun Wang6Yijun Han7Xueting Qu8Yueying Cui9Shimei Qiu10Youxia Di11Xiaoyi Wang12Shige Song13Peiheng Wang14Shilong Xia15Yongle Yu16Weiquan Liu17Yanbo Yin18College of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaQingdao Bolong Experimental Animal Co., Ltd., Qingdao 266225, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaQingdao Bolong Experimental Animal Co., Ltd., Qingdao 266225, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaChina Ostrich Farming and Development Association, Beijing 100026, ChinaChina Ostrich Farming and Development Association, Beijing 100026, ChinaChina Ostrich Farming and Development Association, Beijing 100026, ChinaChina Ostrich Farming and Development Association, Beijing 100026, ChinaChina Ostrich Farming and Development Association, Beijing 100026, ChinaCollege of Biological Sciences, China Agricultural University, Beijing 100193, ChinaCollege of Biological Sciences, China Agricultural University, Beijing 100193, ChinaCollege of Veterinary Medicine, Qingdao Agricultural University, Qingdao 266019, ChinaOstrich diseases characterized by paralysis have been breaking out in broad areas of China since 2015, causing major damage to the ostrich breeding industry in China. This report describes a parvovirus detected in ostriches from four different regions. The entire genomes of four parvovirus strains were sequenced following amplification by PCR, and we conducted comprehensive analysis of the ostrich parvovirus genome. Results showed that the length genomes of the parvovirus contained two open reading frames. Ostrich parvovirus (OsPV) is a branch of goose parvovirus (GPV). Genetic distance analysis revealed a close relationship between the parvovirus and goose parvovirus strains from China, with the closest being the 2016 goose parvovirus RC16 strain from Chongqing. This is the first report of a parvovirus in ostriches. However, whether OsPV is the pathogen of ostrich paralysis remains uncertain. This study contributes new information about the evolution and epidemiology of parvovirus in China, which provides a new way for the study of paralysis in ostriches.https://www.mdpi.com/1999-4915/12/3/334ostrichleg paralysisparvovirusphylogenetic analysiswhole genome amplification
collection DOAJ
language English
format Article
sources DOAJ
author Kunpeng Yuan
Dongdong Wang
Qingdong Luan
Ju Sun
Qianwen Gao
Zhiyao Jiang
Shouchun Wang
Yijun Han
Xueting Qu
Yueying Cui
Shimei Qiu
Youxia Di
Xiaoyi Wang
Shige Song
Peiheng Wang
Shilong Xia
Yongle Yu
Weiquan Liu
Yanbo Yin
spellingShingle Kunpeng Yuan
Dongdong Wang
Qingdong Luan
Ju Sun
Qianwen Gao
Zhiyao Jiang
Shouchun Wang
Yijun Han
Xueting Qu
Yueying Cui
Shimei Qiu
Youxia Di
Xiaoyi Wang
Shige Song
Peiheng Wang
Shilong Xia
Yongle Yu
Weiquan Liu
Yanbo Yin
Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
Viruses
ostrich
leg paralysis
parvovirus
phylogenetic analysis
whole genome amplification
author_facet Kunpeng Yuan
Dongdong Wang
Qingdong Luan
Ju Sun
Qianwen Gao
Zhiyao Jiang
Shouchun Wang
Yijun Han
Xueting Qu
Yueying Cui
Shimei Qiu
Youxia Di
Xiaoyi Wang
Shige Song
Peiheng Wang
Shilong Xia
Yongle Yu
Weiquan Liu
Yanbo Yin
author_sort Kunpeng Yuan
title Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
title_short Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
title_full Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
title_fullStr Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
title_full_unstemmed Whole Genome Characterization and Genetic Evolution Analysis of a New Ostrich Parvovirus
title_sort whole genome characterization and genetic evolution analysis of a new ostrich parvovirus
publisher MDPI AG
series Viruses
issn 1999-4915
publishDate 2020-03-01
description Ostrich diseases characterized by paralysis have been breaking out in broad areas of China since 2015, causing major damage to the ostrich breeding industry in China. This report describes a parvovirus detected in ostriches from four different regions. The entire genomes of four parvovirus strains were sequenced following amplification by PCR, and we conducted comprehensive analysis of the ostrich parvovirus genome. Results showed that the length genomes of the parvovirus contained two open reading frames. Ostrich parvovirus (OsPV) is a branch of goose parvovirus (GPV). Genetic distance analysis revealed a close relationship between the parvovirus and goose parvovirus strains from China, with the closest being the 2016 goose parvovirus RC16 strain from Chongqing. This is the first report of a parvovirus in ostriches. However, whether OsPV is the pathogen of ostrich paralysis remains uncertain. This study contributes new information about the evolution and epidemiology of parvovirus in China, which provides a new way for the study of paralysis in ostriches.
topic ostrich
leg paralysis
parvovirus
phylogenetic analysis
whole genome amplification
url https://www.mdpi.com/1999-4915/12/3/334
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