Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy

Functional lung avoidance radiation therapy aims to minimize dose delivery to the normal lung tissue while favoring dose deposition in the defective lung tissue based on the regional function information. However, the clinical acquisition of pulmonary functional images is resource-demanding, inconve...

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Main Authors: Ge Ren, Sai-kit Lam, Jiang Zhang, Haonan Xiao, Andy Lai-yin Cheung, Wai-yin Ho, Jing Qin, Jing Cai
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-03-01
Series:Frontiers in Oncology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fonc.2021.644703/full
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spelling doaj-a6ddcd96b81246789cb886606b4b63012021-03-24T06:16:50ZengFrontiers Media S.A.Frontiers in Oncology2234-943X2021-03-011110.3389/fonc.2021.644703644703Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance RadiotherapyGe Ren0Sai-kit Lam1Jiang Zhang2Haonan Xiao3Andy Lai-yin Cheung4Wai-yin Ho5Jing Qin6Jing Cai7Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Nuclear Medicine, Queen Mary Hospital, Hong Kong, Hong KongSchool of Nursing, The Hong Kong Polytechnic University, Hong Kong, Hong KongDepartment of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, Hong KongFunctional lung avoidance radiation therapy aims to minimize dose delivery to the normal lung tissue while favoring dose deposition in the defective lung tissue based on the regional function information. However, the clinical acquisition of pulmonary functional images is resource-demanding, inconvenient, and technically challenging. This study aims to investigate the deep learning-based lung functional image synthesis from the CT domain. Forty-two pulmonary macro-aggregated albumin SPECT/CT perfusion scans were retrospectively collected from the hospital. A deep learning-based framework (including image preparation, image processing, and proposed convolutional neural network) was adopted to extract features from 3D CT images and synthesize perfusion as estimations of regional lung function. Ablation experiments were performed to assess the effects of each framework component by removing each element of the framework and analyzing the testing performances. Major results showed that the removal of the CT contrast enhancement component in the image processing resulted in the largest drop in framework performance, compared to the optimal performance (~12%). In the CNN part, all the three components (residual module, ROI attention, and skip attention) were approximately equally important to the framework performance; removing one of them resulted in a 3–5% decline in performance. The proposed CNN improved ~4% overall performance and ~350% computational efficiency, compared to the U-Net model. The deep convolutional neural network, in conjunction with image processing for feature enhancement, is capable of feature extraction from CT images for pulmonary perfusion synthesis. In the proposed framework, image processing, especially CT contrast enhancement, plays a crucial role in the perfusion synthesis. This CTPM framework provides insights for relevant research studies in the future and enables other researchers to leverage for the development of optimized CNN models for functional lung avoidance radiation therapy.https://www.frontiersin.org/articles/10.3389/fonc.2021.644703/fullperfusion imaginglung function imagingdeep learningperfusion synthesisCT based image analysisfunctional lung avoidance radiation therapy
collection DOAJ
language English
format Article
sources DOAJ
author Ge Ren
Sai-kit Lam
Jiang Zhang
Haonan Xiao
Andy Lai-yin Cheung
Wai-yin Ho
Jing Qin
Jing Cai
spellingShingle Ge Ren
Sai-kit Lam
Jiang Zhang
Haonan Xiao
Andy Lai-yin Cheung
Wai-yin Ho
Jing Qin
Jing Cai
Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
Frontiers in Oncology
perfusion imaging
lung function imaging
deep learning
perfusion synthesis
CT based image analysis
functional lung avoidance radiation therapy
author_facet Ge Ren
Sai-kit Lam
Jiang Zhang
Haonan Xiao
Andy Lai-yin Cheung
Wai-yin Ho
Jing Qin
Jing Cai
author_sort Ge Ren
title Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
title_short Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
title_full Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
title_fullStr Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
title_full_unstemmed Investigation of a Novel Deep Learning-Based Computed Tomography Perfusion Mapping Framework for Functional Lung Avoidance Radiotherapy
title_sort investigation of a novel deep learning-based computed tomography perfusion mapping framework for functional lung avoidance radiotherapy
publisher Frontiers Media S.A.
series Frontiers in Oncology
issn 2234-943X
publishDate 2021-03-01
description Functional lung avoidance radiation therapy aims to minimize dose delivery to the normal lung tissue while favoring dose deposition in the defective lung tissue based on the regional function information. However, the clinical acquisition of pulmonary functional images is resource-demanding, inconvenient, and technically challenging. This study aims to investigate the deep learning-based lung functional image synthesis from the CT domain. Forty-two pulmonary macro-aggregated albumin SPECT/CT perfusion scans were retrospectively collected from the hospital. A deep learning-based framework (including image preparation, image processing, and proposed convolutional neural network) was adopted to extract features from 3D CT images and synthesize perfusion as estimations of regional lung function. Ablation experiments were performed to assess the effects of each framework component by removing each element of the framework and analyzing the testing performances. Major results showed that the removal of the CT contrast enhancement component in the image processing resulted in the largest drop in framework performance, compared to the optimal performance (~12%). In the CNN part, all the three components (residual module, ROI attention, and skip attention) were approximately equally important to the framework performance; removing one of them resulted in a 3–5% decline in performance. The proposed CNN improved ~4% overall performance and ~350% computational efficiency, compared to the U-Net model. The deep convolutional neural network, in conjunction with image processing for feature enhancement, is capable of feature extraction from CT images for pulmonary perfusion synthesis. In the proposed framework, image processing, especially CT contrast enhancement, plays a crucial role in the perfusion synthesis. This CTPM framework provides insights for relevant research studies in the future and enables other researchers to leverage for the development of optimized CNN models for functional lung avoidance radiation therapy.
topic perfusion imaging
lung function imaging
deep learning
perfusion synthesis
CT based image analysis
functional lung avoidance radiation therapy
url https://www.frontiersin.org/articles/10.3389/fonc.2021.644703/full
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