A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain

SARS-CoV-2, the novel coronavirus responsible for the ongoing COVID-19 pandemic, has been spreading rampantly. The global scientific community has responded rapidly to understand immune correlates of protection to develop vaccines and immunotherapeutics against the virus. The major goal of this mini...

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Main Authors: Ling Niu, Kathryn N. Wittrock, Gage C. Clabaugh, Vikram Srivastava, Michael W. Cho
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-04-01
Series:Frontiers in Immunology
Subjects:
RBD
Online Access:https://www.frontiersin.org/articles/10.3389/fimmu.2021.647934/full
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spelling doaj-a6c7ca31f266481880fdde90cea086212021-04-28T06:13:59ZengFrontiers Media S.A.Frontiers in Immunology1664-32242021-04-011210.3389/fimmu.2021.647934647934A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding DomainLing Niu0Kathryn N. Wittrock1Gage C. Clabaugh2Vikram Srivastava3Michael W. Cho4Michael W. Cho5Department of Biomedical Sciences, College of Veterinary Medicine, Iowa State University, Ames, IA, United StatesDepartment of Biomedical Sciences, College of Veterinary Medicine, Iowa State University, Ames, IA, United StatesDepartment of Biomedical Sciences, College of Veterinary Medicine, Iowa State University, Ames, IA, United StatesDepartment of Biomedical Sciences, College of Veterinary Medicine, Iowa State University, Ames, IA, United StatesDepartment of Biomedical Sciences, College of Veterinary Medicine, Iowa State University, Ames, IA, United StatesNeoVaxSyn, Inc. Ames, IA, United StatesSARS-CoV-2, the novel coronavirus responsible for the ongoing COVID-19 pandemic, has been spreading rampantly. The global scientific community has responded rapidly to understand immune correlates of protection to develop vaccines and immunotherapeutics against the virus. The major goal of this mini review is to summarize current understanding of the structural landscape of neutralizing antibodies (nAbs) that target the receptor binding domain (RBD) of viral spike (S) glycoprotein. The RBD plays a critical role in the very first step of the virus life cycle. Better understanding of where and how nAbs bind the RBD should enable identification of sites of vulnerability and facilitate better vaccine design and formulation of immunotherapeutics. Towards this goal, we compiled 38 RBD-binding nAbs with known structures. Review of these nAb structures showed that (1) nAbs can be divided into five general clusters, (2) there are distinct non-neutralizing faces on the RBD, and (3) maximum of potentially four nAbs could bind the RBD simultaneously. Since most of these nAbs were isolated from virus-infected patients, additional analyses of vaccine-induced nAbs could facilitate development of improved vaccines.https://www.frontiersin.org/articles/10.3389/fimmu.2021.647934/fullSARS-CoV-2RBDCOVID-19neutralizing antibodyneutralizing epitope
collection DOAJ
language English
format Article
sources DOAJ
author Ling Niu
Kathryn N. Wittrock
Gage C. Clabaugh
Vikram Srivastava
Michael W. Cho
Michael W. Cho
spellingShingle Ling Niu
Kathryn N. Wittrock
Gage C. Clabaugh
Vikram Srivastava
Michael W. Cho
Michael W. Cho
A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
Frontiers in Immunology
SARS-CoV-2
RBD
COVID-19
neutralizing antibody
neutralizing epitope
author_facet Ling Niu
Kathryn N. Wittrock
Gage C. Clabaugh
Vikram Srivastava
Michael W. Cho
Michael W. Cho
author_sort Ling Niu
title A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
title_short A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
title_full A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
title_fullStr A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
title_full_unstemmed A Structural Landscape of Neutralizing Antibodies Against SARS-CoV-2 Receptor Binding Domain
title_sort structural landscape of neutralizing antibodies against sars-cov-2 receptor binding domain
publisher Frontiers Media S.A.
series Frontiers in Immunology
issn 1664-3224
publishDate 2021-04-01
description SARS-CoV-2, the novel coronavirus responsible for the ongoing COVID-19 pandemic, has been spreading rampantly. The global scientific community has responded rapidly to understand immune correlates of protection to develop vaccines and immunotherapeutics against the virus. The major goal of this mini review is to summarize current understanding of the structural landscape of neutralizing antibodies (nAbs) that target the receptor binding domain (RBD) of viral spike (S) glycoprotein. The RBD plays a critical role in the very first step of the virus life cycle. Better understanding of where and how nAbs bind the RBD should enable identification of sites of vulnerability and facilitate better vaccine design and formulation of immunotherapeutics. Towards this goal, we compiled 38 RBD-binding nAbs with known structures. Review of these nAb structures showed that (1) nAbs can be divided into five general clusters, (2) there are distinct non-neutralizing faces on the RBD, and (3) maximum of potentially four nAbs could bind the RBD simultaneously. Since most of these nAbs were isolated from virus-infected patients, additional analyses of vaccine-induced nAbs could facilitate development of improved vaccines.
topic SARS-CoV-2
RBD
COVID-19
neutralizing antibody
neutralizing epitope
url https://www.frontiersin.org/articles/10.3389/fimmu.2021.647934/full
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