Genetic Diversity Among Old Local Grape Cultivars in South of Syria

This investigation was carried out in Sweida governorate of Syria from 2014 to 2015. The purpose of this investigation was to estimate the genetic diversity among 17 old local grape cultivars using morphological traits and SSR molecular markers. Principal Component Analysis (PCA) of morphological tr...

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Main Authors: Bayan M. Muzher, Ola T. Al-Halabi
Format: Article
Language:English
Published: Progressive Sustainable Developers Nepal 2019-09-01
Series:International Journal of Environment
Subjects:
PCA
SSR
Online Access:https://www.nepjol.info/index.php/IJE/article/view/25507
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spelling doaj-a6850ffd8beb467c9b7a46bfb7f59b112020-11-24T22:06:23ZengProgressive Sustainable Developers NepalInternational Journal of Environment2091-28542019-09-0182435410.3126/ije.v8i2.2550725507Genetic Diversity Among Old Local Grape Cultivars in South of SyriaBayan M. Muzher0Ola T. Al-Halabi1General Commission for Scientific Agriculture Research (GCSAR), Sweida, SyriaGeneral Commission for Scientific Agriculture Research (GCSAR), Sweida, SyriaThis investigation was carried out in Sweida governorate of Syria from 2014 to 2015. The purpose of this investigation was to estimate the genetic diversity among 17 old local grape cultivars using morphological traits and SSR molecular markers. Principal Component Analysis (PCA) of morphological traits revealed that four main components were accountable for 50.34 % of variance, with Eigen values of 16.77%, 13.31%, 10.59% and 9.67%, respectively. While distribution of cultivars was found significantly dependent of first and second components, which separated Aswad Sharar and Derbly cultivars rather than other studied cultivars. Hierarchical cluster of morphological traits showed high diversity among studied cultivars. On the other hand, molecular characterization was conducted using eight informative SSR primer pairs, polymorphism was detected by seven SSR's primers. As a result, 18 polymorphic alleles were revealed with a polymorphism percentage of 100%, which reflected the genetic variation among studied cultivars. Genetic similarity was achieved, where 0.875 was the highest between Zeiny and Khedry cultivars, while the other two cultivars Ebeidy and AhmarMokamaa showed the lowest genetic similarity as 0.077. Cluster analysis of SSR markers grouped the studied cultivars into three clusters as per Jaccard coefficient. The first cluster grouped Ebeidy, Aswad Helwany and Derbly cultivars together, the second cluster contained two cultivars Beiady and Alb Atair, while the third cluster contained the remaining cultivars. Consequently, the results showed high diversity among studied cultivars, and some morphological traits were useful for cultivar discrimination.https://www.nepjol.info/index.php/IJE/article/view/25507Grape cultivarsMorphological traitsPCASSR
collection DOAJ
language English
format Article
sources DOAJ
author Bayan M. Muzher
Ola T. Al-Halabi
spellingShingle Bayan M. Muzher
Ola T. Al-Halabi
Genetic Diversity Among Old Local Grape Cultivars in South of Syria
International Journal of Environment
Grape cultivars
Morphological traits
PCA
SSR
author_facet Bayan M. Muzher
Ola T. Al-Halabi
author_sort Bayan M. Muzher
title Genetic Diversity Among Old Local Grape Cultivars in South of Syria
title_short Genetic Diversity Among Old Local Grape Cultivars in South of Syria
title_full Genetic Diversity Among Old Local Grape Cultivars in South of Syria
title_fullStr Genetic Diversity Among Old Local Grape Cultivars in South of Syria
title_full_unstemmed Genetic Diversity Among Old Local Grape Cultivars in South of Syria
title_sort genetic diversity among old local grape cultivars in south of syria
publisher Progressive Sustainable Developers Nepal
series International Journal of Environment
issn 2091-2854
publishDate 2019-09-01
description This investigation was carried out in Sweida governorate of Syria from 2014 to 2015. The purpose of this investigation was to estimate the genetic diversity among 17 old local grape cultivars using morphological traits and SSR molecular markers. Principal Component Analysis (PCA) of morphological traits revealed that four main components were accountable for 50.34 % of variance, with Eigen values of 16.77%, 13.31%, 10.59% and 9.67%, respectively. While distribution of cultivars was found significantly dependent of first and second components, which separated Aswad Sharar and Derbly cultivars rather than other studied cultivars. Hierarchical cluster of morphological traits showed high diversity among studied cultivars. On the other hand, molecular characterization was conducted using eight informative SSR primer pairs, polymorphism was detected by seven SSR's primers. As a result, 18 polymorphic alleles were revealed with a polymorphism percentage of 100%, which reflected the genetic variation among studied cultivars. Genetic similarity was achieved, where 0.875 was the highest between Zeiny and Khedry cultivars, while the other two cultivars Ebeidy and AhmarMokamaa showed the lowest genetic similarity as 0.077. Cluster analysis of SSR markers grouped the studied cultivars into three clusters as per Jaccard coefficient. The first cluster grouped Ebeidy, Aswad Helwany and Derbly cultivars together, the second cluster contained two cultivars Beiady and Alb Atair, while the third cluster contained the remaining cultivars. Consequently, the results showed high diversity among studied cultivars, and some morphological traits were useful for cultivar discrimination.
topic Grape cultivars
Morphological traits
PCA
SSR
url https://www.nepjol.info/index.php/IJE/article/view/25507
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AT olatalhalabi geneticdiversityamongoldlocalgrapecultivarsinsouthofsyria
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