“Altiarchaeales”: Uncultivated Archaea from the Subsurface

Due to the limited cultivability of the vast majority of microorganisms, researchers have applied environmental genomics and other state-of-the-art technologies to gain insights into the biology of uncultivated Archaea and bacteria in their natural biotope. In this review, we summarize the scientifi...

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Main Authors: Alexander J. Probst, Christine Moissl-Eichinger
Format: Article
Language:English
Published: MDPI AG 2015-05-01
Series:Life
Subjects:
Online Access:http://www.mdpi.com/2075-1729/5/2/1381
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spelling doaj-a629d08f88444535835a082ed4ef3d702020-11-25T00:31:09ZengMDPI AGLife2075-17292015-05-01521381139510.3390/life5021381life5021381“Altiarchaeales”: Uncultivated Archaea from the SubsurfaceAlexander J. Probst0Christine Moissl-Eichinger1Department of Earth and Planetary Science, University of California, Berkeley, 307 McCone Hall, Berkeley, CA 94720, USAInteractive Microbiome Research, Section of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University Graz, Graz 8036, AustriaDue to the limited cultivability of the vast majority of microorganisms, researchers have applied environmental genomics and other state-of-the-art technologies to gain insights into the biology of uncultivated Archaea and bacteria in their natural biotope. In this review, we summarize the scientific findings on a recently proposed order-level lineage of uncultivated Archaea called Altiarchaeales, which includes “Candidatus Altiarchaeum hamiconexum” as the most well-described representative. Ca. A. hamiconexum possesses a complex biology: thriving strictly anaerobically, this microorganism is capable of forming highly-pure biofilms, connecting the cells by extraordinary cell surface appendages (the “hami”) and has other highly unusual traits, such as a double-membrane-based cell wall. Indicated by genomic information from different biotopes, the Altiarchaeales seem to proliferate in deep, anoxic groundwater of Earth’s crust bearing a potentially very important function: carbon fixation. Although their net carbon fixation rate has not yet been determined, they appear as highly abundant organisms in their biotopes and may thus represent an important primary producer in the subsurface. In sum, the research over more than a decade on Ca. A. hamiconexum has revealed many interesting features of its lifestyle, its genomic information, metabolism and ultrastructure, making this archaeon one of the best-studied uncultivated Archaea in the literature.http://www.mdpi.com/2075-1729/5/2/1381Archaeasubsurfaceuncultivatedhamisulfidic springs
collection DOAJ
language English
format Article
sources DOAJ
author Alexander J. Probst
Christine Moissl-Eichinger
spellingShingle Alexander J. Probst
Christine Moissl-Eichinger
“Altiarchaeales”: Uncultivated Archaea from the Subsurface
Life
Archaea
subsurface
uncultivated
hami
sulfidic springs
author_facet Alexander J. Probst
Christine Moissl-Eichinger
author_sort Alexander J. Probst
title “Altiarchaeales”: Uncultivated Archaea from the Subsurface
title_short “Altiarchaeales”: Uncultivated Archaea from the Subsurface
title_full “Altiarchaeales”: Uncultivated Archaea from the Subsurface
title_fullStr “Altiarchaeales”: Uncultivated Archaea from the Subsurface
title_full_unstemmed “Altiarchaeales”: Uncultivated Archaea from the Subsurface
title_sort “altiarchaeales”: uncultivated archaea from the subsurface
publisher MDPI AG
series Life
issn 2075-1729
publishDate 2015-05-01
description Due to the limited cultivability of the vast majority of microorganisms, researchers have applied environmental genomics and other state-of-the-art technologies to gain insights into the biology of uncultivated Archaea and bacteria in their natural biotope. In this review, we summarize the scientific findings on a recently proposed order-level lineage of uncultivated Archaea called Altiarchaeales, which includes “Candidatus Altiarchaeum hamiconexum” as the most well-described representative. Ca. A. hamiconexum possesses a complex biology: thriving strictly anaerobically, this microorganism is capable of forming highly-pure biofilms, connecting the cells by extraordinary cell surface appendages (the “hami”) and has other highly unusual traits, such as a double-membrane-based cell wall. Indicated by genomic information from different biotopes, the Altiarchaeales seem to proliferate in deep, anoxic groundwater of Earth’s crust bearing a potentially very important function: carbon fixation. Although their net carbon fixation rate has not yet been determined, they appear as highly abundant organisms in their biotopes and may thus represent an important primary producer in the subsurface. In sum, the research over more than a decade on Ca. A. hamiconexum has revealed many interesting features of its lifestyle, its genomic information, metabolism and ultrastructure, making this archaeon one of the best-studied uncultivated Archaea in the literature.
topic Archaea
subsurface
uncultivated
hami
sulfidic springs
url http://www.mdpi.com/2075-1729/5/2/1381
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