Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.

The Grain to Green Project (GGP) is an unprecedented land restoration action in China. The project converted large areas (ca 10 million ha) of steep-sloped/degraded farmland and barren land into forest and grassland resulting in ecological benefits such as a reduction in severe soil erosion. It may...

Full description

Bibliographic Details
Main Authors: Zhu Chen, Wenliang Wu, Xiaoming Shao, Li Li, Yanbin Guo, Guochun Ding
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4501784?pdf=render
id doaj-a5281b8a896b41dcba7ea681ff9faa48
record_format Article
spelling doaj-a5281b8a896b41dcba7ea681ff9faa482020-11-24T21:27:10ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01107e013287910.1371/journal.pone.0132879Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.Zhu ChenWenliang WuXiaoming ShaoLi LiYanbin GuoGuochun DingThe Grain to Green Project (GGP) is an unprecedented land restoration action in China. The project converted large areas (ca 10 million ha) of steep-sloped/degraded farmland and barren land into forest and grassland resulting in ecological benefits such as a reduction in severe soil erosion. It may also affect soil microorganisms involved in ammonia oxidization, which is a key step in the global nitrogen cycle. The methods for restoration that are typically adopted in semi-arid regions include abandoning farmland and growing drought tolerant grass (Lolium perenne L.) or shrubs (Caragana korshinskii Kom.). In the present study, the effects of these methods on the abundance and diversity of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) were evaluated via quantitative real-time PCR, terminal restriction fragment length polymorphism and clone library analysis of amoA genes. Comparisons were made between soil samples from three restored lands and the adjacent farmland in Inner Mongolia. Both the abundance and community composition of AOB were significantly different between the restored lands and the adjacent control. Significantly lower nitrification activity was observed for the restored land. Clone library analysis revealed that all AOB amoA gene sequences were affiliated with Nitrosospira. Abundance of the populations that were associated with Nitrosospira sp. Nv6 which had possibly adapted to high concentrations of inorganic nitrogen, decreased on the restored land. Only a slight difference in the AOB communities was observed between the restored land with and without the shrub (Caragana korshinskii Kom.). A minor effect of land restoration on AOA was observed. In summary, land restoration negatively affected the abundance of AOB and soil nitrification activities, suggesting the potential role of GGP in the leaching of nitrates, and in the emission of N2O in related terrestrial ecosystems.http://europepmc.org/articles/PMC4501784?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Zhu Chen
Wenliang Wu
Xiaoming Shao
Li Li
Yanbin Guo
Guochun Ding
spellingShingle Zhu Chen
Wenliang Wu
Xiaoming Shao
Li Li
Yanbin Guo
Guochun Ding
Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
PLoS ONE
author_facet Zhu Chen
Wenliang Wu
Xiaoming Shao
Li Li
Yanbin Guo
Guochun Ding
author_sort Zhu Chen
title Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
title_short Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
title_full Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
title_fullStr Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
title_full_unstemmed Shifts in Abundance and Diversity of Soil Ammonia-Oxidizing Bacteria and Archaea Associated with Land Restoration in a Semi-Arid Ecosystem.
title_sort shifts in abundance and diversity of soil ammonia-oxidizing bacteria and archaea associated with land restoration in a semi-arid ecosystem.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2015-01-01
description The Grain to Green Project (GGP) is an unprecedented land restoration action in China. The project converted large areas (ca 10 million ha) of steep-sloped/degraded farmland and barren land into forest and grassland resulting in ecological benefits such as a reduction in severe soil erosion. It may also affect soil microorganisms involved in ammonia oxidization, which is a key step in the global nitrogen cycle. The methods for restoration that are typically adopted in semi-arid regions include abandoning farmland and growing drought tolerant grass (Lolium perenne L.) or shrubs (Caragana korshinskii Kom.). In the present study, the effects of these methods on the abundance and diversity of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA) were evaluated via quantitative real-time PCR, terminal restriction fragment length polymorphism and clone library analysis of amoA genes. Comparisons were made between soil samples from three restored lands and the adjacent farmland in Inner Mongolia. Both the abundance and community composition of AOB were significantly different between the restored lands and the adjacent control. Significantly lower nitrification activity was observed for the restored land. Clone library analysis revealed that all AOB amoA gene sequences were affiliated with Nitrosospira. Abundance of the populations that were associated with Nitrosospira sp. Nv6 which had possibly adapted to high concentrations of inorganic nitrogen, decreased on the restored land. Only a slight difference in the AOB communities was observed between the restored land with and without the shrub (Caragana korshinskii Kom.). A minor effect of land restoration on AOA was observed. In summary, land restoration negatively affected the abundance of AOB and soil nitrification activities, suggesting the potential role of GGP in the leaching of nitrates, and in the emission of N2O in related terrestrial ecosystems.
url http://europepmc.org/articles/PMC4501784?pdf=render
work_keys_str_mv AT zhuchen shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
AT wenliangwu shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
AT xiaomingshao shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
AT lili shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
AT yanbinguo shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
AT guochunding shiftsinabundanceanddiversityofsoilammoniaoxidizingbacteriaandarchaeaassociatedwithlandrestorationinasemiaridecosystem
_version_ 1725976260785471488