Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd

The current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biolog...

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Main Authors: Md. Zia Uddin, Arkajyoti Paul, Ahmed Rakib, Saad Ahmed Sami, Shafi Mahmud, Md. Sohel Rana, Shahadat Hossain, Abu Montakim Tareq, Mycal Dutta, Talha Bin Emran, Jesus Simal-Gandara
Format: Article
Language:English
Published: MDPI AG 2021-02-01
Series:Molecules
Subjects:
Online Access:https://www.mdpi.com/1420-3049/26/4/809
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spelling doaj-a3d8be2268cf442780beff9c70ffd1b72021-02-05T00:03:45ZengMDPI AGMolecules1420-30492021-02-012680980910.3390/molecules26040809Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> WeddMd. Zia Uddin0Arkajyoti Paul1Ahmed Rakib2Saad Ahmed Sami3Shafi Mahmud4Md. Sohel Rana5Shahadat Hossain6Abu Montakim Tareq7Mycal Dutta8Talha Bin Emran9Jesus Simal-Gandara10Department of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, Faculty of Biological Sciences, University of Chittagong, Chittagong 4331, BangladeshDepartment of Pharmacy, Faculty of Biological Sciences, University of Chittagong, Chittagong 4331, BangladeshMicrobiology Laboratory, Bioinformatics Division, Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi 6205, BangladeshDepartment of Pharmacy, Jahangirnagar University, Savar, Dhaka 1342, BangladeshAtomic Energy Centre, East Nasirabad, Chittagong 4209, BangladeshDepartment of Pharmacy, International Islamic University Chittagong, Chittagong 4318, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshNutrition and Bromatology Group, Department of Analytical and Food Chemistry, Faculty of Food Science and Technology, University of Vigo-Ourense Campus, E32004 Ourense, SpainThe current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biological activities with a computational study, including molecular docking, and ADME/T (absorption, distribution, metabolism, and excretion/toxicity) analyses, to identify the phytochemicals that are potentially responsible for the antioxidant, antidepressant, anxiolytic, analgesic, and anti-inflammatory activities of this plant. In the gas chromatography-mass spectroscopy analysis, a total of 24 compounds were identified, seven of which were documented as being bioactive based on their binding affinities. These seven were subjected to molecular docking studies that were correlated with the pharmacological outcomes. Additionally, the ADME/T properties of these compounds were evaluated to determine their drug-like properties and toxicity levels. The seven selected, isolated compounds displayed favorable binding affinities to potassium channels, human serotonin receptor, cyclooxygenase-1 (COX-1), COX-2, nuclear factor (NF)-κB, and human peroxiredoxin 5 receptor proteins. Phytol acetate, and terpene compounds identified in <i>E. papillosum</i> displayed strong predictive binding affinities towards the human serotonin receptor. Furthermore, 3-trifluoroacetoxypentadecane showed a significant binding affinity for the KcsA potassium channel. Eicosanal showed the highest predicted binding affinity towards the human peroxiredoxin 5 receptor. All of these findings support the observed in vivo antidepressant and anxiolytic effects and the in vitro antioxidant effects observed for this extract. The identified compounds from <i>E. papillosum </i>showed the lowest binding affinities towards COX-1, COX-2, and NF-κB receptors, which indicated the inconsequential impacts of this extract against the activities of these three proteins. Overall, <i>E. papillosum</i> appears to be bioactive and could represent a potential source for the development of alternative medicines; however, further analytical experiments remain necessary.https://www.mdpi.com/1420-3049/26/4/809<i>Elatostema papillosum</i>phytochemicalsmedicinal plantstraditional medicinemolecular docking
collection DOAJ
language English
format Article
sources DOAJ
author Md. Zia Uddin
Arkajyoti Paul
Ahmed Rakib
Saad Ahmed Sami
Shafi Mahmud
Md. Sohel Rana
Shahadat Hossain
Abu Montakim Tareq
Mycal Dutta
Talha Bin Emran
Jesus Simal-Gandara
spellingShingle Md. Zia Uddin
Arkajyoti Paul
Ahmed Rakib
Saad Ahmed Sami
Shafi Mahmud
Md. Sohel Rana
Shahadat Hossain
Abu Montakim Tareq
Mycal Dutta
Talha Bin Emran
Jesus Simal-Gandara
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
Molecules
<i>Elatostema papillosum</i>
phytochemicals
medicinal plants
traditional medicine
molecular docking
author_facet Md. Zia Uddin
Arkajyoti Paul
Ahmed Rakib
Saad Ahmed Sami
Shafi Mahmud
Md. Sohel Rana
Shahadat Hossain
Abu Montakim Tareq
Mycal Dutta
Talha Bin Emran
Jesus Simal-Gandara
author_sort Md. Zia Uddin
title Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
title_short Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
title_full Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
title_fullStr Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
title_full_unstemmed Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
title_sort chemical profiles and pharmacological properties with in silico studies on <i>elatostema papillosum</i> wedd
publisher MDPI AG
series Molecules
issn 1420-3049
publishDate 2021-02-01
description The current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biological activities with a computational study, including molecular docking, and ADME/T (absorption, distribution, metabolism, and excretion/toxicity) analyses, to identify the phytochemicals that are potentially responsible for the antioxidant, antidepressant, anxiolytic, analgesic, and anti-inflammatory activities of this plant. In the gas chromatography-mass spectroscopy analysis, a total of 24 compounds were identified, seven of which were documented as being bioactive based on their binding affinities. These seven were subjected to molecular docking studies that were correlated with the pharmacological outcomes. Additionally, the ADME/T properties of these compounds were evaluated to determine their drug-like properties and toxicity levels. The seven selected, isolated compounds displayed favorable binding affinities to potassium channels, human serotonin receptor, cyclooxygenase-1 (COX-1), COX-2, nuclear factor (NF)-κB, and human peroxiredoxin 5 receptor proteins. Phytol acetate, and terpene compounds identified in <i>E. papillosum</i> displayed strong predictive binding affinities towards the human serotonin receptor. Furthermore, 3-trifluoroacetoxypentadecane showed a significant binding affinity for the KcsA potassium channel. Eicosanal showed the highest predicted binding affinity towards the human peroxiredoxin 5 receptor. All of these findings support the observed in vivo antidepressant and anxiolytic effects and the in vitro antioxidant effects observed for this extract. The identified compounds from <i>E. papillosum </i>showed the lowest binding affinities towards COX-1, COX-2, and NF-κB receptors, which indicated the inconsequential impacts of this extract against the activities of these three proteins. Overall, <i>E. papillosum</i> appears to be bioactive and could represent a potential source for the development of alternative medicines; however, further analytical experiments remain necessary.
topic <i>Elatostema papillosum</i>
phytochemicals
medicinal plants
traditional medicine
molecular docking
url https://www.mdpi.com/1420-3049/26/4/809
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