Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd
The current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biolog...
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doaj-a3d8be2268cf442780beff9c70ffd1b72021-02-05T00:03:45ZengMDPI AGMolecules1420-30492021-02-012680980910.3390/molecules26040809Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> WeddMd. Zia Uddin0Arkajyoti Paul1Ahmed Rakib2Saad Ahmed Sami3Shafi Mahmud4Md. Sohel Rana5Shahadat Hossain6Abu Montakim Tareq7Mycal Dutta8Talha Bin Emran9Jesus Simal-Gandara10Department of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, Faculty of Biological Sciences, University of Chittagong, Chittagong 4331, BangladeshDepartment of Pharmacy, Faculty of Biological Sciences, University of Chittagong, Chittagong 4331, BangladeshMicrobiology Laboratory, Bioinformatics Division, Department of Genetic Engineering and Biotechnology, University of Rajshahi, Rajshahi 6205, BangladeshDepartment of Pharmacy, Jahangirnagar University, Savar, Dhaka 1342, BangladeshAtomic Energy Centre, East Nasirabad, Chittagong 4209, BangladeshDepartment of Pharmacy, International Islamic University Chittagong, Chittagong 4318, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshDepartment of Pharmacy, BGC Trust University Bangladesh, Chittagong 4381, BangladeshNutrition and Bromatology Group, Department of Analytical and Food Chemistry, Faculty of Food Science and Technology, University of Vigo-Ourense Campus, E32004 Ourense, SpainThe current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biological activities with a computational study, including molecular docking, and ADME/T (absorption, distribution, metabolism, and excretion/toxicity) analyses, to identify the phytochemicals that are potentially responsible for the antioxidant, antidepressant, anxiolytic, analgesic, and anti-inflammatory activities of this plant. In the gas chromatography-mass spectroscopy analysis, a total of 24 compounds were identified, seven of which were documented as being bioactive based on their binding affinities. These seven were subjected to molecular docking studies that were correlated with the pharmacological outcomes. Additionally, the ADME/T properties of these compounds were evaluated to determine their drug-like properties and toxicity levels. The seven selected, isolated compounds displayed favorable binding affinities to potassium channels, human serotonin receptor, cyclooxygenase-1 (COX-1), COX-2, nuclear factor (NF)-κB, and human peroxiredoxin 5 receptor proteins. Phytol acetate, and terpene compounds identified in <i>E. papillosum</i> displayed strong predictive binding affinities towards the human serotonin receptor. Furthermore, 3-trifluoroacetoxypentadecane showed a significant binding affinity for the KcsA potassium channel. Eicosanal showed the highest predicted binding affinity towards the human peroxiredoxin 5 receptor. All of these findings support the observed in vivo antidepressant and anxiolytic effects and the in vitro antioxidant effects observed for this extract. The identified compounds from <i>E. papillosum </i>showed the lowest binding affinities towards COX-1, COX-2, and NF-κB receptors, which indicated the inconsequential impacts of this extract against the activities of these three proteins. Overall, <i>E. papillosum</i> appears to be bioactive and could represent a potential source for the development of alternative medicines; however, further analytical experiments remain necessary.https://www.mdpi.com/1420-3049/26/4/809<i>Elatostema papillosum</i>phytochemicalsmedicinal plantstraditional medicinemolecular docking |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Md. Zia Uddin Arkajyoti Paul Ahmed Rakib Saad Ahmed Sami Shafi Mahmud Md. Sohel Rana Shahadat Hossain Abu Montakim Tareq Mycal Dutta Talha Bin Emran Jesus Simal-Gandara |
spellingShingle |
Md. Zia Uddin Arkajyoti Paul Ahmed Rakib Saad Ahmed Sami Shafi Mahmud Md. Sohel Rana Shahadat Hossain Abu Montakim Tareq Mycal Dutta Talha Bin Emran Jesus Simal-Gandara Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd Molecules <i>Elatostema papillosum</i> phytochemicals medicinal plants traditional medicine molecular docking |
author_facet |
Md. Zia Uddin Arkajyoti Paul Ahmed Rakib Saad Ahmed Sami Shafi Mahmud Md. Sohel Rana Shahadat Hossain Abu Montakim Tareq Mycal Dutta Talha Bin Emran Jesus Simal-Gandara |
author_sort |
Md. Zia Uddin |
title |
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd |
title_short |
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd |
title_full |
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd |
title_fullStr |
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd |
title_full_unstemmed |
Chemical Profiles and Pharmacological Properties with In Silico Studies on <i>Elatostema papillosum</i> Wedd |
title_sort |
chemical profiles and pharmacological properties with in silico studies on <i>elatostema papillosum</i> wedd |
publisher |
MDPI AG |
series |
Molecules |
issn |
1420-3049 |
publishDate |
2021-02-01 |
description |
The current study attempted, for the first time, to qualitatively and quantitatively determine the phytochemical components of <i>Elatostema papillosum </i>methanol extract and their biological activities. The present study represents an effort to correlate our previously reported biological activities with a computational study, including molecular docking, and ADME/T (absorption, distribution, metabolism, and excretion/toxicity) analyses, to identify the phytochemicals that are potentially responsible for the antioxidant, antidepressant, anxiolytic, analgesic, and anti-inflammatory activities of this plant. In the gas chromatography-mass spectroscopy analysis, a total of 24 compounds were identified, seven of which were documented as being bioactive based on their binding affinities. These seven were subjected to molecular docking studies that were correlated with the pharmacological outcomes. Additionally, the ADME/T properties of these compounds were evaluated to determine their drug-like properties and toxicity levels. The seven selected, isolated compounds displayed favorable binding affinities to potassium channels, human serotonin receptor, cyclooxygenase-1 (COX-1), COX-2, nuclear factor (NF)-κB, and human peroxiredoxin 5 receptor proteins. Phytol acetate, and terpene compounds identified in <i>E. papillosum</i> displayed strong predictive binding affinities towards the human serotonin receptor. Furthermore, 3-trifluoroacetoxypentadecane showed a significant binding affinity for the KcsA potassium channel. Eicosanal showed the highest predicted binding affinity towards the human peroxiredoxin 5 receptor. All of these findings support the observed in vivo antidepressant and anxiolytic effects and the in vitro antioxidant effects observed for this extract. The identified compounds from <i>E. papillosum </i>showed the lowest binding affinities towards COX-1, COX-2, and NF-κB receptors, which indicated the inconsequential impacts of this extract against the activities of these three proteins. Overall, <i>E. papillosum</i> appears to be bioactive and could represent a potential source for the development of alternative medicines; however, further analytical experiments remain necessary. |
topic |
<i>Elatostema papillosum</i> phytochemicals medicinal plants traditional medicine molecular docking |
url |
https://www.mdpi.com/1420-3049/26/4/809 |
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