Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling

Fenugreek (Trigonella foenum-graceum L.) is an important legume crop mainly grown for its pharmacological and nutritional value in Mediterranean region, western Asia, Indian sub-continent and Africa. We evaluated 110 fenugreek accessions from diverse agro-ecological regions i.e. South Asia,...

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Main Authors: Ali Shah Jawad, Mujtaba Muhammad, Ahmad Jan Sohail, Akbar Jadoon Sultan, Ashiq Rabbani Malik, Ghafoor Abdul, Jahanzaib Muhammad, Khurshid Haris
Format: Article
Language:English
Published: Serbian Genetics Society 2018-01-01
Series:Genetika
Subjects:
GIS
Online Access:http://www.doiserbia.nb.rs/img/doi/0534-0012/2018/0534-00121801171A.pdf
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spelling doaj-a22e32457074400eaa53137106f9571f2020-11-24T23:15:07ZengSerbian Genetics SocietyGenetika0534-00121820-60692018-01-0150117118510.2298/GENSR1801171S0534-00121801171AEstimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profilingAli Shah Jawad0Mujtaba Muhammad1Ahmad Jan Sohail2Akbar Jadoon Sultan3Ashiq Rabbani Malik4Ghafoor Abdul5Jahanzaib Muhammad6Khurshid Haris7University of Swabi, Faculty of Agriculture, Department of Plant Breeding and Genetics, PakistanUniversity of Swabi, Faculty of Agriculture, Department of Plant Breeding and Genetics, Pakistan + Ankara University, Institute of Biotechnology, Ankara, TurkeyPlant Genetic Resources Institute, National Agricultural Research Centre, Islamabad, Pakistan + Centre of Biotechnology & Microbiology, University of Swat, Swat, PakistanUniversity of Swabi, Faculty of Agriculture, Department of Plant Breeding and Genetics, PakistanPlant Genetic Resources Institute, National Agricultural Research Centre, Islamabad, PakistanPlant Genetic Resources Institute, National Agricultural Research Centre, Islamabad, PakistanOilseeds Research Program, National Agricultural Research Centre, Islamabad, PakistanOilseeds Research Program, National Agricultural Research Centre, Islamabad, PakistanFenugreek (Trigonella foenum-graceum L.) is an important legume crop mainly grown for its pharmacological and nutritional value in Mediterranean region, western Asia, Indian sub-continent and Africa. We evaluated 110 fenugreek accessions from diverse agro-ecological regions i.e. South Asia, Mediterranean, Middle East, Europe and Africa for phenotypic divergence and seed protein based variation. Significant agro-morphological variability was revealed by germplasm viz-a`-viz traits e.g days to flower initiation, days to flower completion, yield plant-1, plant habit, vigor, flower colour and plant height. Multivariate approach of Principal Component Analysis and Euclidean distance generated dendrogram distributed all accessions into 6 and 9 distinct groups for morpho-agronomic dissimilarities, respectively. Four principal components (PCs) with Eigen value higher than unity (E>1), represented 65% variability in germplasm. Geographical distribution was evident by scatter plot as germplasm figured in 6 different sub-populations. Iranian accessions were most diverse, showing up in all sub-populations followed by Indian, Turkish, Ethiopian, Pakistani and Egyptian accessions which ranked in 5,4,4,3 and 3 sub-populations, respectively. Electrophoretic pattern of seed protein also exhibited considerable polymorphism in the range of 30~100 kDa. Maximum of 16 bands were produced in Turkish PI171872 and Indian PI175321 genotypes. UPGMA based cluster analysis distributed all accessions in 5 groups where accessions from close geographical proximity settled adjacently.http://www.doiserbia.nb.rs/img/doi/0534-0012/2018/0534-00121801171A.pdfFenugreekgenetic diversityGISspatial heterogeneity
collection DOAJ
language English
format Article
sources DOAJ
author Ali Shah Jawad
Mujtaba Muhammad
Ahmad Jan Sohail
Akbar Jadoon Sultan
Ashiq Rabbani Malik
Ghafoor Abdul
Jahanzaib Muhammad
Khurshid Haris
spellingShingle Ali Shah Jawad
Mujtaba Muhammad
Ahmad Jan Sohail
Akbar Jadoon Sultan
Ashiq Rabbani Malik
Ghafoor Abdul
Jahanzaib Muhammad
Khurshid Haris
Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
Genetika
Fenugreek
genetic diversity
GIS
spatial heterogeneity
author_facet Ali Shah Jawad
Mujtaba Muhammad
Ahmad Jan Sohail
Akbar Jadoon Sultan
Ashiq Rabbani Malik
Ghafoor Abdul
Jahanzaib Muhammad
Khurshid Haris
author_sort Ali Shah Jawad
title Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
title_short Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
title_full Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
title_fullStr Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
title_full_unstemmed Estimation of spatial genetic structure in inter-regional populations of Trigonella foenum-graceum L. species through phenotypic variation and seed protein profiling
title_sort estimation of spatial genetic structure in inter-regional populations of trigonella foenum-graceum l. species through phenotypic variation and seed protein profiling
publisher Serbian Genetics Society
series Genetika
issn 0534-0012
1820-6069
publishDate 2018-01-01
description Fenugreek (Trigonella foenum-graceum L.) is an important legume crop mainly grown for its pharmacological and nutritional value in Mediterranean region, western Asia, Indian sub-continent and Africa. We evaluated 110 fenugreek accessions from diverse agro-ecological regions i.e. South Asia, Mediterranean, Middle East, Europe and Africa for phenotypic divergence and seed protein based variation. Significant agro-morphological variability was revealed by germplasm viz-a`-viz traits e.g days to flower initiation, days to flower completion, yield plant-1, plant habit, vigor, flower colour and plant height. Multivariate approach of Principal Component Analysis and Euclidean distance generated dendrogram distributed all accessions into 6 and 9 distinct groups for morpho-agronomic dissimilarities, respectively. Four principal components (PCs) with Eigen value higher than unity (E>1), represented 65% variability in germplasm. Geographical distribution was evident by scatter plot as germplasm figured in 6 different sub-populations. Iranian accessions were most diverse, showing up in all sub-populations followed by Indian, Turkish, Ethiopian, Pakistani and Egyptian accessions which ranked in 5,4,4,3 and 3 sub-populations, respectively. Electrophoretic pattern of seed protein also exhibited considerable polymorphism in the range of 30~100 kDa. Maximum of 16 bands were produced in Turkish PI171872 and Indian PI175321 genotypes. UPGMA based cluster analysis distributed all accessions in 5 groups where accessions from close geographical proximity settled adjacently.
topic Fenugreek
genetic diversity
GIS
spatial heterogeneity
url http://www.doiserbia.nb.rs/img/doi/0534-0012/2018/0534-00121801171A.pdf
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