Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging

Automated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of...

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Main Authors: Wiesmann Veit, Reimer Dorothea, Franz Daniela, Hüttmayer Hanna, Mielenz Dirk, Wittenberg Thomas
Format: Article
Language:English
Published: De Gruyter 2015-09-01
Series:Current Directions in Biomedical Engineering
Subjects:
Online Access:https://doi.org/10.1515/cdbme-2015-0056
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spelling doaj-a2127e4331e3431aa53a24cded2498182021-09-06T19:19:22ZengDe GruyterCurrent Directions in Biomedical Engineering2364-55042015-09-011122422710.1515/cdbme-2015-0056cdbme-2015-0056Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imagingWiesmann Veit0Reimer Dorothea1Franz Daniela2Hüttmayer Hanna3Mielenz Dirk4Wittenberg Thomas5Image Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyDivision of Molecular Immunology, Department of Internal Medicine III, Nikolaus Fiebiger Center, University Hospital Erlangen and Friedrich-Alexander University Erlangen-Nuremberg, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyDivision of Molecular Immunology, Department of Internal Medicine III, Nikolaus Fiebiger Center, University Hospital Erlangen and Friedrich-Alexander University Erlangen-Nuremberg, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyAutomated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of whole slide imaging data of multiple fluorescent labeled cells. After automated parameter adaption the segmentation pipelines provide high quality cell delineations revealing significant differences in the spreading of B cells: LPS-activated B cells spread significantly less on anti CD19 mAb than on anti BCR mAb and both processes could be inhibited by the F-actin destabilizing drug Cytochalasin D. Moreover, anti CD19 mAb induce a more symmetrical spreading than anti BCR mAb as reflected by the higher cell circularity.https://doi.org/10.1515/cdbme-2015-0056automated image analysiswhole slide scanninghigh-throughput analysisb cell receptorspreading
collection DOAJ
language English
format Article
sources DOAJ
author Wiesmann Veit
Reimer Dorothea
Franz Daniela
Hüttmayer Hanna
Mielenz Dirk
Wittenberg Thomas
spellingShingle Wiesmann Veit
Reimer Dorothea
Franz Daniela
Hüttmayer Hanna
Mielenz Dirk
Wittenberg Thomas
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
Current Directions in Biomedical Engineering
automated image analysis
whole slide scanning
high-throughput analysis
b cell receptor
spreading
author_facet Wiesmann Veit
Reimer Dorothea
Franz Daniela
Hüttmayer Hanna
Mielenz Dirk
Wittenberg Thomas
author_sort Wiesmann Veit
title Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
title_short Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
title_full Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
title_fullStr Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
title_full_unstemmed Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
title_sort automated high-throughput analysis of b cell spreading on immobilized antibodies with whole slide imaging
publisher De Gruyter
series Current Directions in Biomedical Engineering
issn 2364-5504
publishDate 2015-09-01
description Automated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of whole slide imaging data of multiple fluorescent labeled cells. After automated parameter adaption the segmentation pipelines provide high quality cell delineations revealing significant differences in the spreading of B cells: LPS-activated B cells spread significantly less on anti CD19 mAb than on anti BCR mAb and both processes could be inhibited by the F-actin destabilizing drug Cytochalasin D. Moreover, anti CD19 mAb induce a more symmetrical spreading than anti BCR mAb as reflected by the higher cell circularity.
topic automated image analysis
whole slide scanning
high-throughput analysis
b cell receptor
spreading
url https://doi.org/10.1515/cdbme-2015-0056
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