Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging
Automated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of...
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doaj-a2127e4331e3431aa53a24cded2498182021-09-06T19:19:22ZengDe GruyterCurrent Directions in Biomedical Engineering2364-55042015-09-011122422710.1515/cdbme-2015-0056cdbme-2015-0056Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imagingWiesmann Veit0Reimer Dorothea1Franz Daniela2Hüttmayer Hanna3Mielenz Dirk4Wittenberg Thomas5Image Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyDivision of Molecular Immunology, Department of Internal Medicine III, Nikolaus Fiebiger Center, University Hospital Erlangen and Friedrich-Alexander University Erlangen-Nuremberg, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyDivision of Molecular Immunology, Department of Internal Medicine III, Nikolaus Fiebiger Center, University Hospital Erlangen and Friedrich-Alexander University Erlangen-Nuremberg, GermanyImage Processing and Medical Engineering Department, Fraunhofer Institute for Integrated Circuits IIS, Erlangen, GermanyAutomated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of whole slide imaging data of multiple fluorescent labeled cells. After automated parameter adaption the segmentation pipelines provide high quality cell delineations revealing significant differences in the spreading of B cells: LPS-activated B cells spread significantly less on anti CD19 mAb than on anti BCR mAb and both processes could be inhibited by the F-actin destabilizing drug Cytochalasin D. Moreover, anti CD19 mAb induce a more symmetrical spreading than anti BCR mAb as reflected by the higher cell circularity.https://doi.org/10.1515/cdbme-2015-0056automated image analysiswhole slide scanninghigh-throughput analysisb cell receptorspreading |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Wiesmann Veit Reimer Dorothea Franz Daniela Hüttmayer Hanna Mielenz Dirk Wittenberg Thomas |
spellingShingle |
Wiesmann Veit Reimer Dorothea Franz Daniela Hüttmayer Hanna Mielenz Dirk Wittenberg Thomas Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging Current Directions in Biomedical Engineering automated image analysis whole slide scanning high-throughput analysis b cell receptor spreading |
author_facet |
Wiesmann Veit Reimer Dorothea Franz Daniela Hüttmayer Hanna Mielenz Dirk Wittenberg Thomas |
author_sort |
Wiesmann Veit |
title |
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging |
title_short |
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging |
title_full |
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging |
title_fullStr |
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging |
title_full_unstemmed |
Automated high-throughput analysis of B cell spreading on immobilized antibodies with whole slide imaging |
title_sort |
automated high-throughput analysis of b cell spreading on immobilized antibodies with whole slide imaging |
publisher |
De Gruyter |
series |
Current Directions in Biomedical Engineering |
issn |
2364-5504 |
publishDate |
2015-09-01 |
description |
Automated image processing methods enable objective, reproducible and high quality analysis of fluorescent cell images in a reasonable amount of time. Therefore, we propose the application of image processing pipelines based on established segmentation algorithms which can handle massive amounts of whole slide imaging data of multiple fluorescent labeled cells. After automated parameter adaption the segmentation pipelines provide high quality cell delineations revealing significant differences in the spreading of B cells: LPS-activated B cells spread significantly less on anti CD19 mAb than on anti BCR mAb and both processes could be inhibited by the F-actin destabilizing drug Cytochalasin D. Moreover, anti CD19 mAb induce a more symmetrical spreading than anti BCR mAb as reflected by the higher cell circularity. |
topic |
automated image analysis whole slide scanning high-throughput analysis b cell receptor spreading |
url |
https://doi.org/10.1515/cdbme-2015-0056 |
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