Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis

<p>Abstract</p> <p>Background</p> <p>In search for genes predisposing to osteoarthritis (OA), several genome wide scans have provided evidence for linkage on 2q. In this study we targeted a 470 kb region on 2q11.2 presenting the locus with most evidence for linkage to s...

Full description

Bibliographic Details
Main Authors: Harilainen Arsi, Saarela Janna, Kouhia Sanna T, Näkki Annu, Tallroth Kaj, Videman Tapio, Battié Michele C, Kaprio Jaakko, Peltonen Leena, Kujala Urho M
Format: Article
Language:English
Published: BMC 2010-03-01
Series:BMC Medical Genetics
Online Access:http://www.biomedcentral.com/1471-2350/11/50
id doaj-a0763e7a50034fa9b75ea315a2d0a035
record_format Article
spelling doaj-a0763e7a50034fa9b75ea315a2d0a0352021-04-02T16:11:27ZengBMCBMC Medical Genetics1471-23502010-03-011115010.1186/1471-2350-11-50Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritisHarilainen ArsiSaarela JannaKouhia Sanna TNäkki AnnuTallroth KajVideman TapioBattié Michele CKaprio JaakkoPeltonen LeenaKujala Urho M<p>Abstract</p> <p>Background</p> <p>In search for genes predisposing to osteoarthritis (OA), several genome wide scans have provided evidence for linkage on 2q. In this study we targeted a 470 kb region on 2q11.2 presenting the locus with most evidence for linkage to severe OA of distal interphalangeal joints (DIP) in our genome wide scan families.</p> <p>Methods</p> <p>We genotyped 32 single nucleotide polymorphisms (SNPs) in this 470 kb region comprising six genes belonging to the interleukin 1 superfamily and monitored for association with individual SNPs and SNP haplotypes among severe familial hand OA cases (material extended from our previous linkage study; n = 134), unrelated end-stage bilateral primary knee OA cases (n = 113), and population based controls (n = 436).</p> <p>Results</p> <p>Four SNPs in the <it>IL1R1 </it>gene, mapping to a 125 kb LD block, provided evidence for association with hand OA in family-based and case-control analysis, the strongest association being with SNP rs2287047 (p-value = 0.0009).</p> <p>Conclusions</p> <p>This study demonstrates an association between severe hand OA and <it>IL1R1 </it>gene. This gene represents a highly relevant biological candidate since it encodes protein that is a known modulator of inflammatory processes associated with joint destruction and resides within a locus providing consistent evidence for linkage to hand OA. As the observed association did not fully explain the linkage obtained in the previous study, it is plausible that also other variants in this genome region predispose to hand OA.</p> http://www.biomedcentral.com/1471-2350/11/50
collection DOAJ
language English
format Article
sources DOAJ
author Harilainen Arsi
Saarela Janna
Kouhia Sanna T
Näkki Annu
Tallroth Kaj
Videman Tapio
Battié Michele C
Kaprio Jaakko
Peltonen Leena
Kujala Urho M
spellingShingle Harilainen Arsi
Saarela Janna
Kouhia Sanna T
Näkki Annu
Tallroth Kaj
Videman Tapio
Battié Michele C
Kaprio Jaakko
Peltonen Leena
Kujala Urho M
Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
BMC Medical Genetics
author_facet Harilainen Arsi
Saarela Janna
Kouhia Sanna T
Näkki Annu
Tallroth Kaj
Videman Tapio
Battié Michele C
Kaprio Jaakko
Peltonen Leena
Kujala Urho M
author_sort Harilainen Arsi
title Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
title_short Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
title_full Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
title_fullStr Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
title_full_unstemmed Allelic variants of <it>IL1R1 </it>gene associate with severe hand osteoarthritis
title_sort allelic variants of <it>il1r1 </it>gene associate with severe hand osteoarthritis
publisher BMC
series BMC Medical Genetics
issn 1471-2350
publishDate 2010-03-01
description <p>Abstract</p> <p>Background</p> <p>In search for genes predisposing to osteoarthritis (OA), several genome wide scans have provided evidence for linkage on 2q. In this study we targeted a 470 kb region on 2q11.2 presenting the locus with most evidence for linkage to severe OA of distal interphalangeal joints (DIP) in our genome wide scan families.</p> <p>Methods</p> <p>We genotyped 32 single nucleotide polymorphisms (SNPs) in this 470 kb region comprising six genes belonging to the interleukin 1 superfamily and monitored for association with individual SNPs and SNP haplotypes among severe familial hand OA cases (material extended from our previous linkage study; n = 134), unrelated end-stage bilateral primary knee OA cases (n = 113), and population based controls (n = 436).</p> <p>Results</p> <p>Four SNPs in the <it>IL1R1 </it>gene, mapping to a 125 kb LD block, provided evidence for association with hand OA in family-based and case-control analysis, the strongest association being with SNP rs2287047 (p-value = 0.0009).</p> <p>Conclusions</p> <p>This study demonstrates an association between severe hand OA and <it>IL1R1 </it>gene. This gene represents a highly relevant biological candidate since it encodes protein that is a known modulator of inflammatory processes associated with joint destruction and resides within a locus providing consistent evidence for linkage to hand OA. As the observed association did not fully explain the linkage obtained in the previous study, it is plausible that also other variants in this genome region predispose to hand OA.</p>
url http://www.biomedcentral.com/1471-2350/11/50
work_keys_str_mv AT harilainenarsi allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT saarelajanna allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT kouhiasannat allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT nakkiannu allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT tallrothkaj allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT videmantapio allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT battiemichelec allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT kapriojaakko allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT peltonenleena allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
AT kujalaurhom allelicvariantsofitil1r1itgeneassociatewithseverehandosteoarthritis
_version_ 1721557548392251392