UMS-Rep: Unified modality-specific representation for efficient medical image analysis

Medical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands great...

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Main Authors: Ghada Zamzmi, Sivaramakrishnan Rajaraman, Sameer Antani
Format: Article
Language:English
Published: Elsevier 2021-01-01
Series:Informatics in Medicine Unlocked
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2352914821000617
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spelling doaj-9fe8fce2aefa4c06b5228c86d7c835092021-06-19T04:55:00ZengElsevierInformatics in Medicine Unlocked2352-91482021-01-0124100571UMS-Rep: Unified modality-specific representation for efficient medical image analysisGhada Zamzmi0Sivaramakrishnan Rajaraman1Sameer Antani2Corresponding author. National Library of Medicine, National Institutes of Health Bethesda, MD USA.; National Library of Medicine, National institutes of Health, Bethesda, MD, USANational Library of Medicine, National institutes of Health, Bethesda, MD, USANational Library of Medicine, National institutes of Health, Bethesda, MD, USAMedical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands greater computational resources, and requires a relatively large amount of labeled data. In this paper, we propose a multi-task training approach for medical image analysis, where individual tasks are fine-tuned simultaneously through relevant knowledge transfer using a unified modality-specific feature representation (UMS-Rep). We explore different fine-tuning strategies to demonstrate the impact of the strategy on the performance of target medical image tasks. We experiment with different visual tasks (e.g., image denoising, segmentation, and classification) to highlight the advantages offered with our approach for two imaging modalities, chest X-ray and Doppler echocardiography. Our results demonstrate that the proposed approach reduces the overall demand for computational resources and improves target task generalization and performance. Specifically, the proposed approach improves accuracy (up to ~ 9% ↑) and decreases computational time (up to ~ 86% ↓) as compared to the baseline approach. Further, our results prove that the performance of target tasks in medical images is highly influenced by the utilized fine-tuning strategy.http://www.sciencedirect.com/science/article/pii/S2352914821000617Medical image analysisDeep learningDisease classificationImage segmentation
collection DOAJ
language English
format Article
sources DOAJ
author Ghada Zamzmi
Sivaramakrishnan Rajaraman
Sameer Antani
spellingShingle Ghada Zamzmi
Sivaramakrishnan Rajaraman
Sameer Antani
UMS-Rep: Unified modality-specific representation for efficient medical image analysis
Informatics in Medicine Unlocked
Medical image analysis
Deep learning
Disease classification
Image segmentation
author_facet Ghada Zamzmi
Sivaramakrishnan Rajaraman
Sameer Antani
author_sort Ghada Zamzmi
title UMS-Rep: Unified modality-specific representation for efficient medical image analysis
title_short UMS-Rep: Unified modality-specific representation for efficient medical image analysis
title_full UMS-Rep: Unified modality-specific representation for efficient medical image analysis
title_fullStr UMS-Rep: Unified modality-specific representation for efficient medical image analysis
title_full_unstemmed UMS-Rep: Unified modality-specific representation for efficient medical image analysis
title_sort ums-rep: unified modality-specific representation for efficient medical image analysis
publisher Elsevier
series Informatics in Medicine Unlocked
issn 2352-9148
publishDate 2021-01-01
description Medical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands greater computational resources, and requires a relatively large amount of labeled data. In this paper, we propose a multi-task training approach for medical image analysis, where individual tasks are fine-tuned simultaneously through relevant knowledge transfer using a unified modality-specific feature representation (UMS-Rep). We explore different fine-tuning strategies to demonstrate the impact of the strategy on the performance of target medical image tasks. We experiment with different visual tasks (e.g., image denoising, segmentation, and classification) to highlight the advantages offered with our approach for two imaging modalities, chest X-ray and Doppler echocardiography. Our results demonstrate that the proposed approach reduces the overall demand for computational resources and improves target task generalization and performance. Specifically, the proposed approach improves accuracy (up to ~ 9% ↑) and decreases computational time (up to ~ 86% ↓) as compared to the baseline approach. Further, our results prove that the performance of target tasks in medical images is highly influenced by the utilized fine-tuning strategy.
topic Medical image analysis
Deep learning
Disease classification
Image segmentation
url http://www.sciencedirect.com/science/article/pii/S2352914821000617
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AT sameerantani umsrepunifiedmodalityspecificrepresentationforefficientmedicalimageanalysis
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