UMS-Rep: Unified modality-specific representation for efficient medical image analysis
Medical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands great...
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2021-01-01
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doaj-9fe8fce2aefa4c06b5228c86d7c835092021-06-19T04:55:00ZengElsevierInformatics in Medicine Unlocked2352-91482021-01-0124100571UMS-Rep: Unified modality-specific representation for efficient medical image analysisGhada Zamzmi0Sivaramakrishnan Rajaraman1Sameer Antani2Corresponding author. National Library of Medicine, National Institutes of Health Bethesda, MD USA.; National Library of Medicine, National institutes of Health, Bethesda, MD, USANational Library of Medicine, National institutes of Health, Bethesda, MD, USANational Library of Medicine, National institutes of Health, Bethesda, MD, USAMedical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands greater computational resources, and requires a relatively large amount of labeled data. In this paper, we propose a multi-task training approach for medical image analysis, where individual tasks are fine-tuned simultaneously through relevant knowledge transfer using a unified modality-specific feature representation (UMS-Rep). We explore different fine-tuning strategies to demonstrate the impact of the strategy on the performance of target medical image tasks. We experiment with different visual tasks (e.g., image denoising, segmentation, and classification) to highlight the advantages offered with our approach for two imaging modalities, chest X-ray and Doppler echocardiography. Our results demonstrate that the proposed approach reduces the overall demand for computational resources and improves target task generalization and performance. Specifically, the proposed approach improves accuracy (up to ~ 9% ↑) and decreases computational time (up to ~ 86% ↓) as compared to the baseline approach. Further, our results prove that the performance of target tasks in medical images is highly influenced by the utilized fine-tuning strategy.http://www.sciencedirect.com/science/article/pii/S2352914821000617Medical image analysisDeep learningDisease classificationImage segmentation |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Ghada Zamzmi Sivaramakrishnan Rajaraman Sameer Antani |
spellingShingle |
Ghada Zamzmi Sivaramakrishnan Rajaraman Sameer Antani UMS-Rep: Unified modality-specific representation for efficient medical image analysis Informatics in Medicine Unlocked Medical image analysis Deep learning Disease classification Image segmentation |
author_facet |
Ghada Zamzmi Sivaramakrishnan Rajaraman Sameer Antani |
author_sort |
Ghada Zamzmi |
title |
UMS-Rep: Unified modality-specific representation for efficient medical image analysis |
title_short |
UMS-Rep: Unified modality-specific representation for efficient medical image analysis |
title_full |
UMS-Rep: Unified modality-specific representation for efficient medical image analysis |
title_fullStr |
UMS-Rep: Unified modality-specific representation for efficient medical image analysis |
title_full_unstemmed |
UMS-Rep: Unified modality-specific representation for efficient medical image analysis |
title_sort |
ums-rep: unified modality-specific representation for efficient medical image analysis |
publisher |
Elsevier |
series |
Informatics in Medicine Unlocked |
issn |
2352-9148 |
publishDate |
2021-01-01 |
description |
Medical image analysis typically includes several tasks such as enhancement, segmentation, and classification. Traditionally, these tasks are implemented using separate deep learning models for separate tasks, which is not efficient because it involves unnecessary training repetitions, demands greater computational resources, and requires a relatively large amount of labeled data. In this paper, we propose a multi-task training approach for medical image analysis, where individual tasks are fine-tuned simultaneously through relevant knowledge transfer using a unified modality-specific feature representation (UMS-Rep). We explore different fine-tuning strategies to demonstrate the impact of the strategy on the performance of target medical image tasks. We experiment with different visual tasks (e.g., image denoising, segmentation, and classification) to highlight the advantages offered with our approach for two imaging modalities, chest X-ray and Doppler echocardiography. Our results demonstrate that the proposed approach reduces the overall demand for computational resources and improves target task generalization and performance. Specifically, the proposed approach improves accuracy (up to ~ 9% ↑) and decreases computational time (up to ~ 86% ↓) as compared to the baseline approach. Further, our results prove that the performance of target tasks in medical images is highly influenced by the utilized fine-tuning strategy. |
topic |
Medical image analysis Deep learning Disease classification Image segmentation |
url |
http://www.sciencedirect.com/science/article/pii/S2352914821000617 |
work_keys_str_mv |
AT ghadazamzmi umsrepunifiedmodalityspecificrepresentationforefficientmedicalimageanalysis AT sivaramakrishnanrajaraman umsrepunifiedmodalityspecificrepresentationforefficientmedicalimageanalysis AT sameerantani umsrepunifiedmodalityspecificrepresentationforefficientmedicalimageanalysis |
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1721371772806234112 |