Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation

Optical tomography is the process of reconstructing the optical properties of biological tissue using measurements of incoming and outgoing light intensity at the tissue boundary. Mathematically, light propagation is modeled by the radiative transfer equation (RTE), and optical tomography amounts to...

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Main Authors: Qin Li, Kit Newton
Format: Article
Language:English
Published: MDPI AG 2019-03-01
Series:Entropy
Subjects:
Online Access:http://www.mdpi.com/1099-4300/21/3/291
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spelling doaj-9f6ad5cf4b47428984aff0428c1771f72020-11-25T00:55:11ZengMDPI AGEntropy1099-43002019-03-0121329110.3390/e21030291e21030291Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer EquationQin Li0Kit Newton1Department of Mathematics, University of Wisconsin-Madison, Madison, WI 53705, USADepartment of Mathematics, University of Wisconsin-Madison, Madison, WI 53705, USAOptical tomography is the process of reconstructing the optical properties of biological tissue using measurements of incoming and outgoing light intensity at the tissue boundary. Mathematically, light propagation is modeled by the radiative transfer equation (RTE), and optical tomography amounts to reconstructing the scattering coefficient in the RTE using the boundary measurements. In the strong scattering regime, the RTE is asymptotically equivalent to the diffusion equation (DE), and the inverse problem becomes reconstructing the diffusion coefficient using Dirichlet and Neumann data on the boundary. We study this problem in the Bayesian framework, meaning that we examine the posterior distribution of the scattering coefficient after the measurements have been taken. However, sampling from this distribution is computationally expensive, since to evaluate each Markov Chain Monte Carlo (MCMC) sample, one needs to run the RTE solvers multiple times. We therefore propose the DE-assisted two-level MCMC technique, in which bad samples are filtered out using DE solvers that are significantly cheaper than RTE solvers. This allows us to make sampling from the RTE posterior distribution computationally feasible.http://www.mdpi.com/1099-4300/21/3/291multi-level MCMCradiative transfer equationinverse problemsdiffusion limit
collection DOAJ
language English
format Article
sources DOAJ
author Qin Li
Kit Newton
spellingShingle Qin Li
Kit Newton
Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
Entropy
multi-level MCMC
radiative transfer equation
inverse problems
diffusion limit
author_facet Qin Li
Kit Newton
author_sort Qin Li
title Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
title_short Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
title_full Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
title_fullStr Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
title_full_unstemmed Diffusion Equation-Assisted Markov Chain Monte Carlo Methods for the Inverse Radiative Transfer Equation
title_sort diffusion equation-assisted markov chain monte carlo methods for the inverse radiative transfer equation
publisher MDPI AG
series Entropy
issn 1099-4300
publishDate 2019-03-01
description Optical tomography is the process of reconstructing the optical properties of biological tissue using measurements of incoming and outgoing light intensity at the tissue boundary. Mathematically, light propagation is modeled by the radiative transfer equation (RTE), and optical tomography amounts to reconstructing the scattering coefficient in the RTE using the boundary measurements. In the strong scattering regime, the RTE is asymptotically equivalent to the diffusion equation (DE), and the inverse problem becomes reconstructing the diffusion coefficient using Dirichlet and Neumann data on the boundary. We study this problem in the Bayesian framework, meaning that we examine the posterior distribution of the scattering coefficient after the measurements have been taken. However, sampling from this distribution is computationally expensive, since to evaluate each Markov Chain Monte Carlo (MCMC) sample, one needs to run the RTE solvers multiple times. We therefore propose the DE-assisted two-level MCMC technique, in which bad samples are filtered out using DE solvers that are significantly cheaper than RTE solvers. This allows us to make sampling from the RTE posterior distribution computationally feasible.
topic multi-level MCMC
radiative transfer equation
inverse problems
diffusion limit
url http://www.mdpi.com/1099-4300/21/3/291
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