Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer

Abstract Background PET/MRI phantom studies are challenged by the need of phantom-specific attenuation templates to account for attenuation properties of the phantom material. We present a PET/MRI phantom built from MRI-visible material for which attenuation correction (AC) can be performed using th...

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Main Authors: Ivo Rausch, Alejandra Valladares, Lalith Kumar Shiyam Sundar, Thomas Beyer, Marcus Hacker, Martin Meyerspeer, Ewald Unger
Format: Article
Language:English
Published: SpringerOpen 2021-02-01
Series:EJNMMI Physics
Subjects:
Online Access:https://doi.org/10.1186/s40658-021-00364-9
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spelling doaj-9f18a70f442d484caf376bb540e02a792021-02-21T12:07:21ZengSpringerOpenEJNMMI Physics2197-73642021-02-018111310.1186/s40658-021-00364-9Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymerIvo Rausch0Alejandra Valladares1Lalith Kumar Shiyam Sundar2Thomas Beyer3Marcus Hacker4Martin Meyerspeer5Ewald Unger6QIMP Team, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaQIMP Team, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaQIMP Team, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaQIMP Team, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaDivision of Nuclear Medicine, Department of Biomedical Imaging and Image-guided Therapy, Medical University of ViennaHigh-Field MR Center, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaQIMP Team, Center for Medical Physics and Biomedical Engineering, Medical University of ViennaAbstract Background PET/MRI phantom studies are challenged by the need of phantom-specific attenuation templates to account for attenuation properties of the phantom material. We present a PET/MRI phantom built from MRI-visible material for which attenuation correction (AC) can be performed using the standard MRI-based AC. Methods A water-fillable phantom was 3D-printed with a commercially available MRI-visible polymer. The phantom had a cylindrical shape and the fillable compartment consisted of a homogeneous region and a region containing solid rods of different diameters. The phantom was filled with a solution of water and [18F]FDG. A 30 min PET/MRI acquisition including the standard Dixon-based MR-AC method was performed. In addition, a CT scan of the phantom was acquired on a PET/CT system. From the Dixon in-phase, opposed-phase and fat images, a phantom-specific AC map (Phantom MR-AC) was produced by separating the phantom material from the water compartment using a thresholding-based method and assigning fixed attenuation coefficients to the individual compartments. The PET data was reconstructed using the Phantom MR-AC, the original Dixon MR-AC, and an MR-AC just containing the water compartment (NoWall-AC) to estimate the error of ignoring the phantom walls. CT-based AC was employed as the reference standard. Average %-differences in measured activity between the CT corrected PET and the PET corrected with the other AC methods were calculated. Results The phantom housing and the liquid compartment were both visible and distinguishable from each other in the Dixon images and allowed the segmentation of a phantom-specific MR-based AC. Compared to the CT-AC PET, average differences in measured activity in the whole water compartment in the phantom of −0.3%, 9.4%, and −24.1% were found for Dixon phantom MR-AC, MR-AC, and NoWall-AC based PET, respectively. Average differences near the phantom wall in the homogeneous region were −0.3%, 6.6%, and −34.3%, respectively. Around the rods, activity differed from the CT-AC PET by 0.7%, 8.9%, and −45.5%, respectively. Conclusion The presented phantom material is visible using standard MR sequences, and thus, supports the use of standard, phantom-independent MR measurements for MR-AC in PET/MRI phantom studies.https://doi.org/10.1186/s40658-021-00364-9PET/MRIPhantom attenuation correctionMR visible polymer
collection DOAJ
language English
format Article
sources DOAJ
author Ivo Rausch
Alejandra Valladares
Lalith Kumar Shiyam Sundar
Thomas Beyer
Marcus Hacker
Martin Meyerspeer
Ewald Unger
spellingShingle Ivo Rausch
Alejandra Valladares
Lalith Kumar Shiyam Sundar
Thomas Beyer
Marcus Hacker
Martin Meyerspeer
Ewald Unger
Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
EJNMMI Physics
PET/MRI
Phantom attenuation correction
MR visible polymer
author_facet Ivo Rausch
Alejandra Valladares
Lalith Kumar Shiyam Sundar
Thomas Beyer
Marcus Hacker
Martin Meyerspeer
Ewald Unger
author_sort Ivo Rausch
title Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
title_short Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
title_full Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
title_fullStr Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
title_full_unstemmed Standard MRI-based attenuation correction for PET/MRI phantoms: a novel concept using MRI-visible polymer
title_sort standard mri-based attenuation correction for pet/mri phantoms: a novel concept using mri-visible polymer
publisher SpringerOpen
series EJNMMI Physics
issn 2197-7364
publishDate 2021-02-01
description Abstract Background PET/MRI phantom studies are challenged by the need of phantom-specific attenuation templates to account for attenuation properties of the phantom material. We present a PET/MRI phantom built from MRI-visible material for which attenuation correction (AC) can be performed using the standard MRI-based AC. Methods A water-fillable phantom was 3D-printed with a commercially available MRI-visible polymer. The phantom had a cylindrical shape and the fillable compartment consisted of a homogeneous region and a region containing solid rods of different diameters. The phantom was filled with a solution of water and [18F]FDG. A 30 min PET/MRI acquisition including the standard Dixon-based MR-AC method was performed. In addition, a CT scan of the phantom was acquired on a PET/CT system. From the Dixon in-phase, opposed-phase and fat images, a phantom-specific AC map (Phantom MR-AC) was produced by separating the phantom material from the water compartment using a thresholding-based method and assigning fixed attenuation coefficients to the individual compartments. The PET data was reconstructed using the Phantom MR-AC, the original Dixon MR-AC, and an MR-AC just containing the water compartment (NoWall-AC) to estimate the error of ignoring the phantom walls. CT-based AC was employed as the reference standard. Average %-differences in measured activity between the CT corrected PET and the PET corrected with the other AC methods were calculated. Results The phantom housing and the liquid compartment were both visible and distinguishable from each other in the Dixon images and allowed the segmentation of a phantom-specific MR-based AC. Compared to the CT-AC PET, average differences in measured activity in the whole water compartment in the phantom of −0.3%, 9.4%, and −24.1% were found for Dixon phantom MR-AC, MR-AC, and NoWall-AC based PET, respectively. Average differences near the phantom wall in the homogeneous region were −0.3%, 6.6%, and −34.3%, respectively. Around the rods, activity differed from the CT-AC PET by 0.7%, 8.9%, and −45.5%, respectively. Conclusion The presented phantom material is visible using standard MR sequences, and thus, supports the use of standard, phantom-independent MR measurements for MR-AC in PET/MRI phantom studies.
topic PET/MRI
Phantom attenuation correction
MR visible polymer
url https://doi.org/10.1186/s40658-021-00364-9
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