Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines

Lymphoblastoid cell lines (LCLs) are a highly successful model for evaluating the genetic etiology of cancer drug response, but applications using this model have typically focused on single drugs. Combination therapy is quite common in modern chemotherapy treatment since drugs often work synergisti...

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Main Authors: Kyle R. Roell, Tammy M. Havener, David M. Reif, John Jack, Howard L. McLeod, Tim Wiltshire, Alison A. Motsinger-Reif
Format: Article
Language:English
Published: Frontiers Media S.A. 2019-10-01
Series:Frontiers in Genetics
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fgene.2019.00829/full
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spelling doaj-9f04ec0542dc4709902de0da0c28679f2020-11-25T01:25:38ZengFrontiers Media S.A.Frontiers in Genetics1664-80212019-10-011010.3389/fgene.2019.00829464886Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell LinesKyle R. Roell0Kyle R. Roell1Tammy M. Havener2David M. Reif3John Jack4John Jack5Howard L. McLeod6Tim Wiltshire7Alison A. Motsinger-Reif8Department of Statistics, North Carolina State University, Raleigh, NC, United StatesBioinformatics Research Center, North Carolina State University, Raleigh, NC, United StatesPharmacotherapy and Experimental Therapeutics, University of North Carolina at Chapel Hill, Chapel Hill, NC, United StatesDepartment of Statistics, North Carolina State University, Raleigh, NC, United StatesDepartment of Statistics, North Carolina State University, Raleigh, NC, United StatesBioinformatics Research Center, North Carolina State University, Raleigh, NC, United StatesThe DeBartolo Family Personalized Medicine Institute, Moffitt Cancer Center, Tampa, FL, United StatesCenter for Pharmacogenomics and Individualized Therapy, University of North Carolina at Chapel Hill, Chapel Hill, NC, United StatesBiostatistics and Computational Biology Branch, National Institute of Environmental Health Sciences, Durham, NC, United StatesLymphoblastoid cell lines (LCLs) are a highly successful model for evaluating the genetic etiology of cancer drug response, but applications using this model have typically focused on single drugs. Combination therapy is quite common in modern chemotherapy treatment since drugs often work synergistically, and it is an important progression in the use of the LCL model to expand work for drug combinations. In the present work, we demonstrate that synergy occurs and can be quantified in LCLs across a range of clinically important drug combinations. Lymphoblastoid cell lines have been commonly employed in association mapping in cancer pharmacogenomics, but it is so far untested as to whether synergistic effects have a genetic etiology. Here we use cell lines from extended pedigrees to demonstrate that there is a substantial heritable component to synergistic drug response. Additionally, we perform linkage mapping in these pedigrees to identify putative regions linked to this important phenotype. This demonstration supports the premise of expanding the use of the LCL model to perform association mapping for combination therapies.https://www.frontiersin.org/article/10.3389/fgene.2019.00829/fullsynergyheritabilitychemotherapylymphoblastoid cell lineslinkage mapping
collection DOAJ
language English
format Article
sources DOAJ
author Kyle R. Roell
Kyle R. Roell
Tammy M. Havener
David M. Reif
John Jack
John Jack
Howard L. McLeod
Tim Wiltshire
Alison A. Motsinger-Reif
spellingShingle Kyle R. Roell
Kyle R. Roell
Tammy M. Havener
David M. Reif
John Jack
John Jack
Howard L. McLeod
Tim Wiltshire
Alison A. Motsinger-Reif
Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
Frontiers in Genetics
synergy
heritability
chemotherapy
lymphoblastoid cell lines
linkage mapping
author_facet Kyle R. Roell
Kyle R. Roell
Tammy M. Havener
David M. Reif
John Jack
John Jack
Howard L. McLeod
Tim Wiltshire
Alison A. Motsinger-Reif
author_sort Kyle R. Roell
title Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
title_short Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
title_full Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
title_fullStr Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
title_full_unstemmed Synergistic Chemotherapy Drug Response Is a Genetic Trait in Lymphoblastoid Cell Lines
title_sort synergistic chemotherapy drug response is a genetic trait in lymphoblastoid cell lines
publisher Frontiers Media S.A.
series Frontiers in Genetics
issn 1664-8021
publishDate 2019-10-01
description Lymphoblastoid cell lines (LCLs) are a highly successful model for evaluating the genetic etiology of cancer drug response, but applications using this model have typically focused on single drugs. Combination therapy is quite common in modern chemotherapy treatment since drugs often work synergistically, and it is an important progression in the use of the LCL model to expand work for drug combinations. In the present work, we demonstrate that synergy occurs and can be quantified in LCLs across a range of clinically important drug combinations. Lymphoblastoid cell lines have been commonly employed in association mapping in cancer pharmacogenomics, but it is so far untested as to whether synergistic effects have a genetic etiology. Here we use cell lines from extended pedigrees to demonstrate that there is a substantial heritable component to synergistic drug response. Additionally, we perform linkage mapping in these pedigrees to identify putative regions linked to this important phenotype. This demonstration supports the premise of expanding the use of the LCL model to perform association mapping for combination therapies.
topic synergy
heritability
chemotherapy
lymphoblastoid cell lines
linkage mapping
url https://www.frontiersin.org/article/10.3389/fgene.2019.00829/full
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