Comparative Genomics of Cryptosporidium

Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95...

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Main Authors: Aurélien J. Mazurie, João M. Alves, Luiz S. Ozaki, Shiguo Zhou, David C. Schwartz, Gregory A. Buck
Format: Article
Language:English
Published: Hindawi Limited 2013-01-01
Series:International Journal of Genomics
Online Access:http://dx.doi.org/10.1155/2013/832756
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spelling doaj-9eec856ee9554c6eba8ee6126692edc82020-11-24T22:56:10ZengHindawi LimitedInternational Journal of Genomics2314-436X2314-43782013-01-01201310.1155/2013/832756832756Comparative Genomics of CryptosporidiumAurélien J. Mazurie0João M. Alves1Luiz S. Ozaki2Shiguo Zhou3David C. Schwartz4Gregory A. Buck5Department of Microbiology, Montana State University, Bozeman, MT 59717, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USALaboratory for Molecular and Computational Genomics, Department of Chemistry, Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USALaboratory for Molecular and Computational Genomics, Department of Chemistry, Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USAUntil recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95–97% identity. The availability of the complete genome sequences of these organisms provides the potential to identify the genetic variations that are responsible for the phenotypic differences between the two parasites. We compared the genome organization and structure, gene composition, the metabolic and other pathways, and the local sequence identity between the genes of these two Cryptosporidium species. Our observations show that the phenotypic differences between C. hominis and C. parvum are not due to gross genome rearrangements, structural alterations, gene deletions or insertions, metabolic capabilities, or other obvious genomic alterations. Rather, the results indicate that these genomes exhibit a remarkable structural and compositional conservation and suggest that the phenotypic differences observed are due to subtle variations in the sequences of proteins that act at the interface between the parasite and its host.http://dx.doi.org/10.1155/2013/832756
collection DOAJ
language English
format Article
sources DOAJ
author Aurélien J. Mazurie
João M. Alves
Luiz S. Ozaki
Shiguo Zhou
David C. Schwartz
Gregory A. Buck
spellingShingle Aurélien J. Mazurie
João M. Alves
Luiz S. Ozaki
Shiguo Zhou
David C. Schwartz
Gregory A. Buck
Comparative Genomics of Cryptosporidium
International Journal of Genomics
author_facet Aurélien J. Mazurie
João M. Alves
Luiz S. Ozaki
Shiguo Zhou
David C. Schwartz
Gregory A. Buck
author_sort Aurélien J. Mazurie
title Comparative Genomics of Cryptosporidium
title_short Comparative Genomics of Cryptosporidium
title_full Comparative Genomics of Cryptosporidium
title_fullStr Comparative Genomics of Cryptosporidium
title_full_unstemmed Comparative Genomics of Cryptosporidium
title_sort comparative genomics of cryptosporidium
publisher Hindawi Limited
series International Journal of Genomics
issn 2314-436X
2314-4378
publishDate 2013-01-01
description Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95–97% identity. The availability of the complete genome sequences of these organisms provides the potential to identify the genetic variations that are responsible for the phenotypic differences between the two parasites. We compared the genome organization and structure, gene composition, the metabolic and other pathways, and the local sequence identity between the genes of these two Cryptosporidium species. Our observations show that the phenotypic differences between C. hominis and C. parvum are not due to gross genome rearrangements, structural alterations, gene deletions or insertions, metabolic capabilities, or other obvious genomic alterations. Rather, the results indicate that these genomes exhibit a remarkable structural and compositional conservation and suggest that the phenotypic differences observed are due to subtle variations in the sequences of proteins that act at the interface between the parasite and its host.
url http://dx.doi.org/10.1155/2013/832756
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