Comparative Genomics of Cryptosporidium
Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95...
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Online Access: | http://dx.doi.org/10.1155/2013/832756 |
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doaj-9eec856ee9554c6eba8ee6126692edc82020-11-24T22:56:10ZengHindawi LimitedInternational Journal of Genomics2314-436X2314-43782013-01-01201310.1155/2013/832756832756Comparative Genomics of CryptosporidiumAurélien J. Mazurie0João M. Alves1Luiz S. Ozaki2Shiguo Zhou3David C. Schwartz4Gregory A. Buck5Department of Microbiology, Montana State University, Bozeman, MT 59717, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USALaboratory for Molecular and Computational Genomics, Department of Chemistry, Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USALaboratory for Molecular and Computational Genomics, Department of Chemistry, Laboratory of Genetics, University of Wisconsin-Madison, Madison, WI 53706, USADepartment of Microbiology and Immunology, Virginia Commonwealth University, Richmond, VA 23284-2030, USAUntil recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95–97% identity. The availability of the complete genome sequences of these organisms provides the potential to identify the genetic variations that are responsible for the phenotypic differences between the two parasites. We compared the genome organization and structure, gene composition, the metabolic and other pathways, and the local sequence identity between the genes of these two Cryptosporidium species. Our observations show that the phenotypic differences between C. hominis and C. parvum are not due to gross genome rearrangements, structural alterations, gene deletions or insertions, metabolic capabilities, or other obvious genomic alterations. Rather, the results indicate that these genomes exhibit a remarkable structural and compositional conservation and suggest that the phenotypic differences observed are due to subtle variations in the sequences of proteins that act at the interface between the parasite and its host.http://dx.doi.org/10.1155/2013/832756 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Aurélien J. Mazurie João M. Alves Luiz S. Ozaki Shiguo Zhou David C. Schwartz Gregory A. Buck |
spellingShingle |
Aurélien J. Mazurie João M. Alves Luiz S. Ozaki Shiguo Zhou David C. Schwartz Gregory A. Buck Comparative Genomics of Cryptosporidium International Journal of Genomics |
author_facet |
Aurélien J. Mazurie João M. Alves Luiz S. Ozaki Shiguo Zhou David C. Schwartz Gregory A. Buck |
author_sort |
Aurélien J. Mazurie |
title |
Comparative Genomics of Cryptosporidium |
title_short |
Comparative Genomics of Cryptosporidium |
title_full |
Comparative Genomics of Cryptosporidium |
title_fullStr |
Comparative Genomics of Cryptosporidium |
title_full_unstemmed |
Comparative Genomics of Cryptosporidium |
title_sort |
comparative genomics of cryptosporidium |
publisher |
Hindawi Limited |
series |
International Journal of Genomics |
issn |
2314-436X 2314-4378 |
publishDate |
2013-01-01 |
description |
Until recently, the apicomplexan parasites, Cryptosporidium hominis and C. parvum, were considered the same species. However, the two parasites, now considered distinct species, exhibit significant differences in host range, infectivity, and pathogenicity, and their sequenced genomes exhibit only 95–97% identity. The availability of the complete genome sequences of these organisms provides the potential to identify the genetic variations that are responsible for the phenotypic differences between the two parasites. We compared the genome organization and structure, gene composition, the metabolic and other pathways, and the local sequence identity between the genes of these two Cryptosporidium species. Our observations show that the phenotypic differences between C. hominis and C. parvum are not due to gross genome rearrangements, structural alterations, gene deletions or insertions, metabolic capabilities, or other obvious genomic alterations. Rather, the results indicate that these genomes exhibit a remarkable structural and compositional conservation and suggest that the phenotypic differences observed are due to subtle variations in the sequences of proteins that act at the interface between the parasite and its host. |
url |
http://dx.doi.org/10.1155/2013/832756 |
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1725654633774317568 |