Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins

Phase transitions of linear multivalent proteins control the reversible formation of many intracellular membraneless bodies. Specific non-covalent crosslinks involving domains/motifs lead to system-spanning networks referred to as gels. Gelation transitions can occur with or without phase separation...

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Main Authors: Tyler S Harmon, Alex S Holehouse, Michael K Rosen, Rohit V Pappu
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2017-11-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/30294
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spelling doaj-9e4e7d6cb7f54e61ade9e5571082a0f22021-05-05T13:54:43ZengeLife Sciences Publications LtdeLife2050-084X2017-11-01610.7554/eLife.30294Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteinsTyler S Harmon0Alex S Holehouse1https://orcid.org/0000-0002-4155-5729Michael K Rosen2https://orcid.org/0000-0002-0775-7917Rohit V Pappu3https://orcid.org/0000-0003-2568-1378Center for Biological Systems Engineering, Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, United StatesCenter for Biological Systems Engineering, Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, United StatesDepartment of Biophysics, Howard Hughes Medical Institute, UT Southwestern Medical Center, Dallas, United StatesCenter for Biological Systems Engineering, Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, United StatesPhase transitions of linear multivalent proteins control the reversible formation of many intracellular membraneless bodies. Specific non-covalent crosslinks involving domains/motifs lead to system-spanning networks referred to as gels. Gelation transitions can occur with or without phase separation. In gelation driven by phase separation multivalent proteins and their ligands condense into dense droplets, and gels form within droplets. System spanning networks can also form without a condensation or demixing of proteins into droplets. Gelation driven by phase separation requires lower protein concentrations, and seems to be the biologically preferred mechanism for forming membraneless bodies. Here, we use coarse-grained computer simulations and the theory of associative polymers to uncover the physical properties of intrinsically disordered linkers that determine the extent to which gelation of linear multivalent proteins is driven by phase separation. Our findings are relevant for understanding how sequence-encoded information in disordered linkers influences phase transitions of multivalent proteins.https://elifesciences.org/articles/30294phase transitionsphase separationgelationintrinsically disordered proteinsmultivalent proteinscomputation
collection DOAJ
language English
format Article
sources DOAJ
author Tyler S Harmon
Alex S Holehouse
Michael K Rosen
Rohit V Pappu
spellingShingle Tyler S Harmon
Alex S Holehouse
Michael K Rosen
Rohit V Pappu
Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
eLife
phase transitions
phase separation
gelation
intrinsically disordered proteins
multivalent proteins
computation
author_facet Tyler S Harmon
Alex S Holehouse
Michael K Rosen
Rohit V Pappu
author_sort Tyler S Harmon
title Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
title_short Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
title_full Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
title_fullStr Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
title_full_unstemmed Intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
title_sort intrinsically disordered linkers determine the interplay between phase separation and gelation in multivalent proteins
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2017-11-01
description Phase transitions of linear multivalent proteins control the reversible formation of many intracellular membraneless bodies. Specific non-covalent crosslinks involving domains/motifs lead to system-spanning networks referred to as gels. Gelation transitions can occur with or without phase separation. In gelation driven by phase separation multivalent proteins and their ligands condense into dense droplets, and gels form within droplets. System spanning networks can also form without a condensation or demixing of proteins into droplets. Gelation driven by phase separation requires lower protein concentrations, and seems to be the biologically preferred mechanism for forming membraneless bodies. Here, we use coarse-grained computer simulations and the theory of associative polymers to uncover the physical properties of intrinsically disordered linkers that determine the extent to which gelation of linear multivalent proteins is driven by phase separation. Our findings are relevant for understanding how sequence-encoded information in disordered linkers influences phase transitions of multivalent proteins.
topic phase transitions
phase separation
gelation
intrinsically disordered proteins
multivalent proteins
computation
url https://elifesciences.org/articles/30294
work_keys_str_mv AT tylersharmon intrinsicallydisorderedlinkersdeterminetheinterplaybetweenphaseseparationandgelationinmultivalentproteins
AT alexsholehouse intrinsicallydisorderedlinkersdeterminetheinterplaybetweenphaseseparationandgelationinmultivalentproteins
AT michaelkrosen intrinsicallydisorderedlinkersdeterminetheinterplaybetweenphaseseparationandgelationinmultivalentproteins
AT rohitvpappu intrinsicallydisorderedlinkersdeterminetheinterplaybetweenphaseseparationandgelationinmultivalentproteins
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