Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.

Somatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is...

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Main Authors: Elisabetta Iavarone, Jane Yi, Ying Shi, Bas-Jan Zandt, Christian O'Reilly, Werner Van Geit, Christian Rössert, Henry Markram, Sean L Hill
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-05-01
Series:PLoS Computational Biology
Online Access:https://doi.org/10.1371/journal.pcbi.1006753
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spelling doaj-9e1af7dcbecb41309bf7cdbd7225a6e32021-04-21T15:11:15ZengPublic Library of Science (PLoS)PLoS Computational Biology1553-734X1553-73582019-05-01155e100675310.1371/journal.pcbi.1006753Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.Elisabetta IavaroneJane YiYing ShiBas-Jan ZandtChristian O'ReillyWerner Van GeitChristian RössertHenry MarkramSean L HillSomatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is reflected at the cellular level by the ability to generate action potentials in two distinct firing modes, called tonic firing and low-threshold bursting. Although the general properties of TC neurons are known, we still lack a detailed characterization of their morphological and electrical properties in the VB thalamus. The aim of this study was to build biophysically-detailed models of VB TC neurons explicitly constrained with experimental data from rats. We recorded the electrical activity of VB neurons (N = 49) and reconstructed morphologies in 3D (N = 50) by applying standardized protocols. After identifying distinct electrical types, we used a multi-objective optimization to fit single neuron electrical models (e-models), which yielded multiple solutions consistent with the experimental data. The models were tested for generalization using electrical stimuli and neuron morphologies not used during fitting. A local sensitivity analysis revealed that the e-models are robust to small parameter changes and that all the parameters were constrained by one or more features. The e-models, when tested in combination with different morphologies, showed that the electrical behavior is substantially preserved when changing dendritic structure and that the e-models were not overfit to a specific morphology. The models and their analysis show that automatic parameter search can be applied to capture complex firing behavior, such as co-existence of tonic firing and low-threshold bursting over a wide range of parameter sets and in combination with different neuron morphologies.https://doi.org/10.1371/journal.pcbi.1006753
collection DOAJ
language English
format Article
sources DOAJ
author Elisabetta Iavarone
Jane Yi
Ying Shi
Bas-Jan Zandt
Christian O'Reilly
Werner Van Geit
Christian Rössert
Henry Markram
Sean L Hill
spellingShingle Elisabetta Iavarone
Jane Yi
Ying Shi
Bas-Jan Zandt
Christian O'Reilly
Werner Van Geit
Christian Rössert
Henry Markram
Sean L Hill
Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
PLoS Computational Biology
author_facet Elisabetta Iavarone
Jane Yi
Ying Shi
Bas-Jan Zandt
Christian O'Reilly
Werner Van Geit
Christian Rössert
Henry Markram
Sean L Hill
author_sort Elisabetta Iavarone
title Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
title_short Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
title_full Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
title_fullStr Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
title_full_unstemmed Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
title_sort experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons.
publisher Public Library of Science (PLoS)
series PLoS Computational Biology
issn 1553-734X
1553-7358
publishDate 2019-05-01
description Somatosensory thalamocortical (TC) neurons from the ventrobasal (VB) thalamus are central components in the flow of sensory information between the periphery and the cerebral cortex, and participate in the dynamic regulation of thalamocortical states including wakefulness and sleep. This property is reflected at the cellular level by the ability to generate action potentials in two distinct firing modes, called tonic firing and low-threshold bursting. Although the general properties of TC neurons are known, we still lack a detailed characterization of their morphological and electrical properties in the VB thalamus. The aim of this study was to build biophysically-detailed models of VB TC neurons explicitly constrained with experimental data from rats. We recorded the electrical activity of VB neurons (N = 49) and reconstructed morphologies in 3D (N = 50) by applying standardized protocols. After identifying distinct electrical types, we used a multi-objective optimization to fit single neuron electrical models (e-models), which yielded multiple solutions consistent with the experimental data. The models were tested for generalization using electrical stimuli and neuron morphologies not used during fitting. A local sensitivity analysis revealed that the e-models are robust to small parameter changes and that all the parameters were constrained by one or more features. The e-models, when tested in combination with different morphologies, showed that the electrical behavior is substantially preserved when changing dendritic structure and that the e-models were not overfit to a specific morphology. The models and their analysis show that automatic parameter search can be applied to capture complex firing behavior, such as co-existence of tonic firing and low-threshold bursting over a wide range of parameter sets and in combination with different neuron morphologies.
url https://doi.org/10.1371/journal.pcbi.1006753
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