Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria

Background and Objective: Various infections and the formation of stones could be the cause for bile duct obstruction of that sterile organ. Determination of pathogenesis factors and the bacteria involved in infections are important in the prevention of disease, and cares needed following surgery. T...

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Main Authors: Parastoo Ehsani, Fateme Farahany, Negar Daeizadeh, Melika Amya, Moein Saleh, Mina Ebrahimi-Rad, Karamollah Toolabi
Format: Article
Language:fas
Published: Golestan University of Medical Sciences 2019-10-01
Series:مجله دانشگاه علوم پزشکی گرگان
Subjects:
Online Access:http://goums.ac.ir/journal/article-1-3422-en.html
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record_format Article
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language fas
format Article
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author Parastoo Ehsani
Fateme Farahany
Negar Daeizadeh
Melika Amya
Moein Saleh
Mina Ebrahimi-Rad
Karamollah Toolabi
spellingShingle Parastoo Ehsani
Fateme Farahany
Negar Daeizadeh
Melika Amya
Moein Saleh
Mina Ebrahimi-Rad
Karamollah Toolabi
Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
مجله دانشگاه علوم پزشکی گرگان
Choelitiasis
Entrobacteriace
Biofilm
Polymerase Chain Reaction
author_facet Parastoo Ehsani
Fateme Farahany
Negar Daeizadeh
Melika Amya
Moein Saleh
Mina Ebrahimi-Rad
Karamollah Toolabi
author_sort Parastoo Ehsani
title Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
title_short Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
title_full Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
title_fullStr Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
title_full_unstemmed Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
title_sort determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria
publisher Golestan University of Medical Sciences
series مجله دانشگاه علوم پزشکی گرگان
issn 1562-4765
2008-4080
publishDate 2019-10-01
description Background and Objective: Various infections and the formation of stones could be the cause for bile duct obstruction of that sterile organ. Determination of pathogenesis factors and the bacteria involved in infections are important in the prevention of disease, and cares needed following surgery. This study was done to determine the bacteria in the gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria. Methods: In this descriptive laboratory study, 35 samples of gallbladder tissues which contained gallstones were collected under sterile conditions in “Department of General Surgery of Imam Khomeini Hospital”, Tehran, Iran during 2016. The stone types were analyzed and decomposed by chemical procedures, and the bacteria existed in the tissues were also identified using biochemical experiments. The tissues with negative results in microbiological studies were looked for any contaminating bacteria, applying the DNA extracted from gallbladder tissue as a template using F27 and R1492 as the primers for PCR (Polymerase Chain Reaction) amplification of 16SrRNA gene. Those with the positive results of microbiological tests were subjected to the DNA sequencing following gel purification and blasted against the NCBI gene database. The most frequently isolated bacteria were studied according to the intensity of biofilm formation, using the microtitre plate method. CsgF and Ag43 (Flu), the genes involved in the induction of such phenotype were also analyzed in this study. The antibiotic resistance assay of the isolates was performed using disc diffusion procedure. Results: Thirteen out of thirty five samples of post-surgery gallbladder tissues were found to be infected by different bacteria, including: Klebsiella (3 cases), Escherichia coli (4 cases), Enterobacter (1 case), Staphylococcus aureus (2 cases), Enterococci (2 cases), and Streptococcus (1 case). In 23 out of 35 samples (65.7%), no bacteria could be isolated using microbiological methods. However, in seven out of 23 samples, the amplified 16SrRNA had an indication of Klebsiella (6 cases) and Enterococcus (1 case) isolates. Therefore, the most prevalent genus in gallbladder infections was Klebsiella (47.36%). Chemical analysis showed that the highly frequent compound of gallstones (98%) were of cholesterol and bilirubin. Escherichia coli with fourcases were the highest culture growing isolated bacteria, in all of which, the biofilm formation genes were present. In the two out of four Escherichia coli isolates the intensity of biofilm formation was high. Although, in the remaining two isolates was medium. While, they were found to be sensitive to the most of the antibiotics, they showed resistance to Tetracycline, Ciprofloxacin and Ceftazidime in different ranges. Conclusion: The present study provided evidence that non-cultural bacteria are hihly present in gallbladder infections. The high potential of the commonly isolated bacteria in biofilm formation should be taken as a warning to follow the precise protocol of antibiotic prescription for treatment of gallbladder infections.
topic Choelitiasis
Entrobacteriace
Biofilm
Polymerase Chain Reaction
url http://goums.ac.ir/journal/article-1-3422-en.html
work_keys_str_mv AT parastooehsani determinationofbacteriaingallbladderofpatientswithcholelithiasisandevaluationofpathogenicfactorsoftheprevalentisolatedbacteria
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spelling doaj-9d1864dd87fe4a89a6bf8313c834ca9a2020-11-25T01:36:58ZfasGolestan University of Medical Sciences مجله دانشگاه علوم پزشکی گرگان1562-47652008-40802019-10-01213120128Determination of bacteria in gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteriaParastoo Ehsani0Fateme Farahany1Negar Daeizadeh2Melika Amya3Moein Saleh4Mina Ebrahimi-Rad5Karamollah Toolabi6 Ph.D in Biological Products, Associate Professor, Department of Molecular Biology, Pasteur Institute of Iran, Tehran, Iran Microbiologist, Department of Molecular Biology, Pasteur Institute of Iran, Tehran, Iran M.Sc in Biotechnoloy, Department of Molecular Biology, Pasteur Institute of Iran, Tehran, Iran Microbiologist, Department of Molecular Biology, Pasteur Institute of Iran, Tehran, Iran M.Sc in Microbial Biotechnology, Department of Molecular Biology, Pasteur Institute of Iran, Tehran, Iran Ph.D in Medical Biotechnology, Assistant Professor , Department of Biochemistry, Pasteur Institute of Iran, Tehran, Iran Associate Professor, Department of Laparoscopic Surgery, Imam Khomeini Hospital, Tehran, Iran Background and Objective: Various infections and the formation of stones could be the cause for bile duct obstruction of that sterile organ. Determination of pathogenesis factors and the bacteria involved in infections are important in the prevention of disease, and cares needed following surgery. This study was done to determine the bacteria in the gallbladder of patients with cholelithiasis and evaluation of pathogenic factors of the prevalent isolated bacteria. Methods: In this descriptive laboratory study, 35 samples of gallbladder tissues which contained gallstones were collected under sterile conditions in “Department of General Surgery of Imam Khomeini Hospital”, Tehran, Iran during 2016. The stone types were analyzed and decomposed by chemical procedures, and the bacteria existed in the tissues were also identified using biochemical experiments. The tissues with negative results in microbiological studies were looked for any contaminating bacteria, applying the DNA extracted from gallbladder tissue as a template using F27 and R1492 as the primers for PCR (Polymerase Chain Reaction) amplification of 16SrRNA gene. Those with the positive results of microbiological tests were subjected to the DNA sequencing following gel purification and blasted against the NCBI gene database. The most frequently isolated bacteria were studied according to the intensity of biofilm formation, using the microtitre plate method. CsgF and Ag43 (Flu), the genes involved in the induction of such phenotype were also analyzed in this study. The antibiotic resistance assay of the isolates was performed using disc diffusion procedure. Results: Thirteen out of thirty five samples of post-surgery gallbladder tissues were found to be infected by different bacteria, including: Klebsiella (3 cases), Escherichia coli (4 cases), Enterobacter (1 case), Staphylococcus aureus (2 cases), Enterococci (2 cases), and Streptococcus (1 case). In 23 out of 35 samples (65.7%), no bacteria could be isolated using microbiological methods. However, in seven out of 23 samples, the amplified 16SrRNA had an indication of Klebsiella (6 cases) and Enterococcus (1 case) isolates. Therefore, the most prevalent genus in gallbladder infections was Klebsiella (47.36%). Chemical analysis showed that the highly frequent compound of gallstones (98%) were of cholesterol and bilirubin. Escherichia coli with fourcases were the highest culture growing isolated bacteria, in all of which, the biofilm formation genes were present. In the two out of four Escherichia coli isolates the intensity of biofilm formation was high. Although, in the remaining two isolates was medium. While, they were found to be sensitive to the most of the antibiotics, they showed resistance to Tetracycline, Ciprofloxacin and Ceftazidime in different ranges. Conclusion: The present study provided evidence that non-cultural bacteria are hihly present in gallbladder infections. The high potential of the commonly isolated bacteria in biofilm formation should be taken as a warning to follow the precise protocol of antibiotic prescription for treatment of gallbladder infections.http://goums.ac.ir/journal/article-1-3422-en.htmlChoelitiasisEntrobacteriaceBiofilmPolymerase Chain Reaction