Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles
Volvariella volvacea is an important crop in Southeast Asia, but erratic fruiting presents a serious challenge for its production and breeding. Efforts to explain inconsistent fruiting have been complicated by the multinucleate nature, typical lack of clamp connections, and an incompletely identifie...
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2016-07-01
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doaj-9cf8e7d5634540dc8ad884d5ef9e58a52021-07-02T11:08:01ZengOxford University PressG3: Genes, Genomes, Genetics2160-18362016-07-01672135214610.1534/g3.116.03070033Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life CyclesBingzhi ChenArend F. van PeerJunjie YanXiao LiBin XieJuan MiaoQianhui HuangLei ZhangWei WangJunsheng FuXiang ZhangXiaoyin ZhangFengli HuQingfang KongXianyun SunFeng ZouHanxing ZhangShaojie LiBaogui XieVolvariella volvacea is an important crop in Southeast Asia, but erratic fruiting presents a serious challenge for its production and breeding. Efforts to explain inconsistent fruiting have been complicated by the multinucleate nature, typical lack of clamp connections, and an incompletely identified sexual reproductive system. In this study, we addressed the life cycle of V. volvacea using whole genome sequencing, cloning of MAT loci, karyotyping of spores, and fruiting assays. Microscopy analysis of spores had previously indicated the possible coexistence of heterothallic and homothallic life cycles. Our analysis of the MAT loci showed that only MAT-A, and not MAT-B, controlled heterokaryotization. Thus, the heterothallic life cycle was bipolar. Karyotyping of single spore isolates (SSIs) using molecular markers supported the existence of heterokaryotic spores. However, most SSIs were clearly not heterokaryotic, yet contained structural variation (SV) markers relating to both alleles of both parents. Heterokaryons from crossed, self-sterile homokaryons could produce fruiting bodies, agreeing with bipolar heterothallism. Meanwhile, some SSIs with two different MAT-A loci also produced fruiting bodies, which supported secondary homothallism. Next, SSIs that clearly contained only one MAT-A locus (homothallism) were also able to fruit, demonstrating that self-fertile SSIs were not, per definition, secondary homothallic, and that a third life cycle or genetic mechanism must exist. Finally, recombination between SV markers was normal, yet 10 out of 24 SV markers showed 1:2 or 1:3 distributions in the spores, and large numbers of SSIs contained doubled SV markers. This indicated selfish genes, and possibly partial aneuploidy.http://g3journal.org/lookup/doi/10.1534/g3.116.030700Volvariella volvaceagenomic analysismating-type systemaneuploidyamphithallic |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Bingzhi Chen Arend F. van Peer Junjie Yan Xiao Li Bin Xie Juan Miao Qianhui Huang Lei Zhang Wei Wang Junsheng Fu Xiang Zhang Xiaoyin Zhang Fengli Hu Qingfang Kong Xianyun Sun Feng Zou Hanxing Zhang Shaojie Li Baogui Xie |
spellingShingle |
Bingzhi Chen Arend F. van Peer Junjie Yan Xiao Li Bin Xie Juan Miao Qianhui Huang Lei Zhang Wei Wang Junsheng Fu Xiang Zhang Xiaoyin Zhang Fengli Hu Qingfang Kong Xianyun Sun Feng Zou Hanxing Zhang Shaojie Li Baogui Xie Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles G3: Genes, Genomes, Genetics Volvariella volvacea genomic analysis mating-type system aneuploidy amphithallic |
author_facet |
Bingzhi Chen Arend F. van Peer Junjie Yan Xiao Li Bin Xie Juan Miao Qianhui Huang Lei Zhang Wei Wang Junsheng Fu Xiang Zhang Xiaoyin Zhang Fengli Hu Qingfang Kong Xianyun Sun Feng Zou Hanxing Zhang Shaojie Li Baogui Xie |
author_sort |
Bingzhi Chen |
title |
Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles |
title_short |
Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles |
title_full |
Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles |
title_fullStr |
Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles |
title_full_unstemmed |
Fruiting Body Formation in Volvariella volvacea Can Occur Independently of Its MAT-A-Controlled Bipolar Mating System, Enabling Homothallic and Heterothallic Life Cycles |
title_sort |
fruiting body formation in volvariella volvacea can occur independently of its mat-a-controlled bipolar mating system, enabling homothallic and heterothallic life cycles |
publisher |
Oxford University Press |
series |
G3: Genes, Genomes, Genetics |
issn |
2160-1836 |
publishDate |
2016-07-01 |
description |
Volvariella volvacea is an important crop in Southeast Asia, but erratic fruiting presents a serious challenge for its production and breeding. Efforts to explain inconsistent fruiting have been complicated by the multinucleate nature, typical lack of clamp connections, and an incompletely identified sexual reproductive system. In this study, we addressed the life cycle of V. volvacea using whole genome sequencing, cloning of MAT loci, karyotyping of spores, and fruiting assays. Microscopy analysis of spores had previously indicated the possible coexistence of heterothallic and homothallic life cycles. Our analysis of the MAT loci showed that only MAT-A, and not MAT-B, controlled heterokaryotization. Thus, the heterothallic life cycle was bipolar. Karyotyping of single spore isolates (SSIs) using molecular markers supported the existence of heterokaryotic spores. However, most SSIs were clearly not heterokaryotic, yet contained structural variation (SV) markers relating to both alleles of both parents. Heterokaryons from crossed, self-sterile homokaryons could produce fruiting bodies, agreeing with bipolar heterothallism. Meanwhile, some SSIs with two different MAT-A loci also produced fruiting bodies, which supported secondary homothallism. Next, SSIs that clearly contained only one MAT-A locus (homothallism) were also able to fruit, demonstrating that self-fertile SSIs were not, per definition, secondary homothallic, and that a third life cycle or genetic mechanism must exist. Finally, recombination between SV markers was normal, yet 10 out of 24 SV markers showed 1:2 or 1:3 distributions in the spores, and large numbers of SSIs contained doubled SV markers. This indicated selfish genes, and possibly partial aneuploidy. |
topic |
Volvariella volvacea genomic analysis mating-type system aneuploidy amphithallic |
url |
http://g3journal.org/lookup/doi/10.1534/g3.116.030700 |
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