Evaluation of the Ion AmpliSeq™ PhenoTrivium Panel: MPS-Based Assay for Ancestry and Phenotype Predictions Challenged by Casework Samples

Evaluation of the Ion AmpliSeq™ PhenoTrivium Panel: MPS-Based Assay for Ancestry and Phenotype Predictions Challenged by Casework Samples

As the field of forensic DNA analysis has started to transition from genetics to genomics, new methods to aid in crime scene investigations have arisen. The development of informative single nucleotide polymorphism (SNP) markers has led the forensic community to question if DNA can be a reliable “ey...

Full description

Bibliographic Details
Main Authors:	Marta Diepenbroek, Birgit Bayer, Kristina Schwender, Roberta Schiller, Jessica Lim, Robert Lagacé, Katja Anslinger
Format:	Article
Language:	English
Published:	MDPI AG 2020-11-01
Series:	Genes
Subjects:	forensic phenotyping HIrisPlex-S massively parallel sequencing next-generation sequencing ancestry appearance
Online Access:	https://www.mdpi.com/2073-4425/11/12/1398

Similar Items

Pushing the Boundaries: Forensic DNA Phenotyping Challenged by Single-Cell Sequencing
by: Marta Diepenbroek, et al.
Published: (2021-08-01)

Evaluation of the VISAGE Basic Tool for Appearance and Ancestry Prediction Using PowerSeq Chemistry on the MiSeq FGx System
by: Leire Palencia-Madrid, et al.
Published: (2020-06-01)

Evaluation of the Performance of AmpliSeq and SureSelect Exome Sequencing Libraries for Ion Proton
by: Piyush Gampawar, et al.
Published: (2019-09-01)

Computational Functional Genomics-Based AmpliSeq™ Panel for Next-Generation Sequencing of Key Genes of Pain
by: Dario Kringel, et al.
Published: (2021-01-01)

Evaluation of the Ion AmpliSeq SARS-CoV-2 Research Panel by Massive Parallel Sequencing
by: Federica Alessandrini, et al.
Published: (2020-08-01)

Identification of risk factors contributing to venous thromboembolism by Ion Torrent sequencing using an AmpliSeq strategy
by: Lucchesi, Patrik
Published: (2017)

Association of Alanine Aminotransferase Levels (ALT) with the Hepatic Insulin Resistance Index (HIRI): a cross-sectional study
by: Gómez-Sámano Miguel, et al.
Published: (2012-09-01)

Identification of Novel Mutations in Colorectal Cancer Patients Using AmpliSeq Comprehensive Cancer Panel
by: Bader Almuzzaini, et al.
Published: (2021-06-01)

Pros and cons of HaloPlex enrichment in cancer predisposition genetic diagnosis
by: Agnès Collet, et al.
Published: (2015-12-01)

Two Novel Mutations Associated With Ataxia-Telangiectasia Identified Using an Ion AmpliSeq Inherited Disease Panel
by: Maria V. Kuznetsova, et al.
Published: (2017-10-01)

Dietary Inorganic Nitrate Protects Hepatic Ischemia-Reperfusion Injury Through NRF2-Mediated Antioxidative Stress
by: Shaorong Li, et al.
Published: (2021-06-01)

AmpliSeq transcriptome analysis of human alveolar and monocyte-derived macrophages over time in response to Mycobacterium tuberculosis infection.
by: Audrey C Papp, et al.
Published: (2018-01-01)

Establishment of CRISPR/Cas9 Genome Editing in Witloof (Cichorium intybus var. foliosum)
by: Charlotte De Bruyn, et al.
Published: (2020-12-01)

Whole-Genome Sequencing and iPLEX MassARRAY Genotyping Map an EMS-Induced Mutation Affecting Cell Competition in Drosophila melanogaster
by: Chang-Hyun Lee, et al.
Published: (2016-10-01)

Main level of cytokines in patients with psoriasis
by: A. S. Beltyukova, et al.
Published: (2017-08-01)

The Use of Emerging Technologies in Allergen Immunotherapy Management
by: Giovanni Melioli, et al.
Published: (2017-08-01)

pyAmpli: an amplicon-based variant filter pipeline for targeted resequencing data
by: Matthias Beyens, et al.
Published: (2017-12-01)

Corrigendum: Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries
by: Amir Arastehfar, et al.
Published: (2019-05-01)

Comparison of 21-Plex PCR and API 20C AUX, MALDI-TOF MS, and rDNA Sequencing for a Wide Range of Clinically Isolated Yeast Species: Improved Identification by Combining 21-Plex PCR and API 20C AUX as an Alternative Strategy for Developing Countries
by: Amir Arastehfar, et al.
Published: (2019-02-01)

PowerPlex® fusion 6C system: internal validation study
by: Ana Boavida, et al.
Published: (2018-04-01)

Query Optimal k-Plex Based Community in Graphs
by: Yue Wang, et al.
Published: (2017-11-01)

Population dataset for 21 simple tandem repeat loci in the Akan population of Ghana
by: Abban Edward Kofi, et al.
Published: (2020-08-01)

Novel approaches for solving large-scale optimization problems on graphs
by: Trukhanov, Svyatoslav
Published: (2010)

PCR digitale pour la détection et la caractérisation de micro-organismes pathogènes au niveau de la cellule unique
by: Trouchet, Amandine
Published: (2016)

Development of an AmpliSeqTM Panel for Next-Generation Sequencing of a Set of Genetic Predictors of Persisting Pain
by: Dario Kringel, et al.
Published: (2018-09-01)

Mitochondrial Sequencing of Missing Persons DNA Casework by Implementing Thermo Fisher’s Precision ID mtDNA Whole Genome Assay
by: Daniela Cuenca, et al.
Published: (2020-11-01)

Developmental Validation of a MPS Workflow with a PCR-Based Short Amplicon Whole Mitochondrial Genome Panel
by: Jennifer Churchill Cihlar, et al.
Published: (2020-11-01)

Applicability of human-specific STR systems, GlobalFiler™ PCR Amplification Kit, Investigator 24plex QS Kit, and PowerPlex® Fusion 6C in chimpanzee (Pan troglodytes)
by: Abhishek Singh, et al.
Published: (2021-05-01)

AmpliSeq Screening of Genes Encoding the C-Type Lectin Receptors and Their Signaling Components Reveals a Common Variant in MASP1 Associated with Pulmonary Tuberculosis in an Indian Population
by: Tilman E. Klassert, et al.
Published: (2018-02-01)

Plasma exchange as a first line therapy in acute attacks of neuromyelitis optica spectrum disorders
by: B L Kumawat, et al.
Published: (2019-01-01)

Evaluation of a <i>PlexZyme</i>-Based PCR Assay and Assessment of COVID-19 Surge Testing Throughput Compared to Cobas SARS-CoV-2
by: Todd M. Pryce, et al.
Published: (2021-08-01)

Model of employees motivation through gamification of information system / Darbuotojų motyvavimo žaidybinimo priemonėmis informacinėje sistemoje modelis
by: Jolanta Kostecka, et al.
Published: (2015-05-01)

Next-generation sequencing of the human TRPV1 gene and the regulating co-players LTB4R and LTB4R2 based on a custom AmpliSeq™ panel.
by: Dario Kringel, et al.
Published: (2017-01-01)

Selection and Characterization of Single-Domain Antibodies for Detection of Lassa Nucleoprotein
by: George P. Anderson, et al.
Published: (2020-12-01)

Developmental validation of the VersaPlex™ 27PY system
by: Kristy A. Lenz, et al.
Published: (2020-12-01)

A Review on the Principles and Criteria of Plex Housing
by: Reaz Sorosh Nia, et al.
Published: (2020-12-01)

Analyzing magnetic bead QuantiGene® Plex 2.0 gene expression data in high throughput mode using QGprofiler
by: Bie Verbist, et al.
Published: (2019-07-01)

Sensitive Detection of Nucleic Acids Using Subzyme Feedback Cascades
by: Nicole Hasick, et al.
Published: (2020-04-01)

Allele frequencies distribution of 16 forensic STR loci in a Western Sicilian population sample
by: Elvira Ventura Spagnolo, et al.
Published: (2017-09-01)

Selection of Single-Domain Antibodies towards Western Equine Encephalitis Virus
by: Jinny L. Liu, et al.
Published: (2018-12-01)